RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ATP5LO75964 103 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 HKR1P10072 659 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 FOLR2P14207 255 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 XAF1Q6GPH4 301 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 KCNS1Q96KK3 526 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 SIRT4Q9Y6E7 314 aaPredicted RBP7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 TLN2Q9Y4G6 2542 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 A0A1B0GVG6 124 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 C7orf71A4D174 169 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 IL11P20809 199 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 EFNB2P52799 333 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 LCN2P80188 198 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 DKK4Q9UBT3 224 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 EXPH5Q8NEV8 1989 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 TRGV4A0A0C4DH28 118 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 MINOS1Q5TGZ0 78 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 PPP1R27Q86WC6 154 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 MARVELD3Q96A59 401 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 HDHD3Q9BSH5 251 aaPredicted RBP7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 MINOS1-NBL1R4GNA1 71 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 IGKV1D-42A0A075B6H8 117 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 TRBV9A0A0B4J1U6 114 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 EIF3GO75821 320 aaKnown RBP eCLIP7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 MS4A3Q96HJ5 214 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 FOXC2Q99958 501 aa7.04□□□□□ -1.28
PCDHB1-201ENST00000306549 OR11H4Q8NGC9 324 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 VCX2Q9H322 139 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 AKIP1Q9NQ31 210 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 VSIG8P0DPA2 414 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 FAM27E3Q08E93 113 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 STPG2Q8N412 459 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 NEUROG1Q92886 237 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 F8WEM9 126 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 TYMSP04818 313 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 KLF2Q9Y5W3 355 aaPredicted RBP7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 FAM166AQ6J272 317 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 TPRX1Q8N7U7 411 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 FBLIM1Q8WUP2 373 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 SPSB4Q96A44 273 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 C1QTNF9BB2RNN3 333 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 RBKSQ9H477 322 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 CD8AP01732 235 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 SOD3P08294 240 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 GPX4P36969 197 aaPredicted RBP7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 ARPC1AQ92747 370 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 CEACAM8P31997 349 aaPredicted RBP7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 PKIAP61925 76 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 ZNF324BQ6AW86 544 aaPredicted RBP7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 FBXL7Q9UJT9 491 aa7.03□□□□□ -1.28
PCDHB1-201ENST00000306549 ATP6V0CP27449 155 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 PLA2G5P39877 138 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 EGR4Q05215 589 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 Q96M66 194 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 ZNF488Q96MN9 340 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 AKIRIN1Q9H9L7 192 aaPredicted RBP7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 SPRR3Q9UBC9 169 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 CENPVL1A0A0U1RR11 272 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 MARCH11A6NNE9 402 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 NDUFB4O95168 129 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 PRADC1Q9BSG0 188 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 M0R381 172 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 SLC25A34Q6PIV7 304 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 TRBV5-7A0A0A0MS05 114 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 M0R1W7 72 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 GOLT1AQ6ZVE7 132 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 MBD3L1Q8WWY6 194 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 AQP3Q92482 292 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 HIST1H2BAQ96A08 127 aa7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 MEF2BQ02080 365 aaPredicted RBP7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 SRSF7Q16629 238 aaKnown RBP eCLIP7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 MRPL16Q9NX20 251 aaKnown RBP7.02□□□□□ -1.29
PCDHB1-201ENST00000306549 KLF4O43474 513 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 TDGF1P3P51864 188 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 SNAI3Q3KNW1 292 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 C3orf56Q8N813 242 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 OR2K2Q8NGT1 345 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 TM2D1Q9BX74 207 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 TMEM222Q9H0R3 208 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 GATAD1Q8WUU5 269 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 C21orf62Q9NYP8 219 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 NAV2Q8IVL1 2488 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 A0A1B0GW15 77 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 LINC00587B1AMM8 73 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 ZG16O60844 167 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 REG1AP05451 166 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 GGACTQ9BVM4 153 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 TBL2Q9Y4P3 447 aaKnown RBP7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 KBTBD11-OT1A0A1B0GTJ5 212 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 J3QLI3 93 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 CD33P20138 364 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 A0A087WX48 190 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 MOSP00540 346 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 ZNF345Q14585 488 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 UBE2V2Q15819 145 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 Q6AWC8 147 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 COLCA1Q6ZS62 124 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 IGKV1D-33P01593 117 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 IGKV1-33P01594 117 aa7.01□□□□□ -1.29
PCDHB1-201ENST00000306549 ZNF415Q09FC8 603 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms