RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CYP2G1PQ6ZSU1 146 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 DTX2Q86UW9 622 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 NABP2Q9BQ15 211 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 IGSF23A1L1A6 192 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 SEC11BP0C7V7 166 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 CX3CL1P78423 397 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 PRNTQ86SH4 94 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 SIGLECL1Q8N7X8 197 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 GATAD1Q8WUU5 269 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 C19orf24Q9BVV8 132 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 S100A12P80511 92 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 HIST1H1AQ02539 215 aaPredicted RBP7.57□□□□□ -1.2
PTPRE-202ENST00000306042 TMEM241Q24JQ0 296 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 SLC7A5P1Q8MH63 180 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 KIR3DL3Q8N743 410 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 NEURL2Q9BR09 285 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 PGPA6NDG6 321 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 PPP1R2P9O14990 202 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 CD69Q07108 199 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 FAM71F2Q6NXP2 309 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 ZNF600Q6ZNG1 722 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 LCNL1Q6ZST4 164 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 ZNF429Q86V71 674 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 PIP4P2Q8N4L2 257 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 C5orf17Q8NAS9 161 aa7.57□□□□□ -1.2
PTPRE-202ENST00000306042 RGS13O14921 159 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 LDLRAD4O15165 306 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 P01737 135 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 RIPPLY3P57055 190 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 C15orf32Q32M92 178 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 FREM1Q5H8C1 2179 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 OR4C46A6NHA9 309 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 GGCTO75223 188 aaKnown RBP7.56□□□□□ -1.2
PTPRE-202ENST00000306042 AMY1AP04745 511 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 PRCDQ00LT1 54 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 IFITM3Q01628 133 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 PAX8Q06710 450 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 C10orf55Q5SWW7 151 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 TEX261Q6UWH6 196 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 OR51M1Q9H341 326 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 IFT22Q9H7X7 185 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 TRAV14DV4A0A0A6YYC5 116 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 RNASEK-C17orf49H0YIS7 233 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 NAT1P18440 290 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 LDLRAD2Q5SZI1 272 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 LINC00305Q7Z4B0 112 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 GGACTQ9BVM4 153 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 GPX1P07203 203 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 ZNF581Q9P0T4 197 aa7.56□□□□□ -1.2
PTPRE-202ENST00000306042 A0A1W2PPQ1 181 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 H3BTX0 84 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 HOXA3O43365 443 aaPredicted RBP7.55□□□□□ -1.2
PTPRE-202ENST00000306042 OR2C1O95371 312 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 ERVK11-1P61568 191 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 ZNF345Q14585 488 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 NCOR1P1Q9H4R4 102 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 VAX2Q9UIW0 290 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 FASNP49327 2511 aaKnown RBP7.55□□□□□ -1.2
PTPRE-202ENST00000306042 RBFOX3A6NFN3 312 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 C22orf46C9J442 243 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 PDE6DO43924 150 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 SNCGO76070 127 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 UBE2DNLQ8IWF7 75 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 MRPL32Q9BYC8 188 aaKnown RBP7.55□□□□□ -1.2
PTPRE-202ENST00000306042 SIGLEC9Q9Y336 463 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 TMSB15BA0A087X1C1 80 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 TEX50A0A1B0GTY4 177 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 VENTXO95231 258 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 GPX4P36969 197 aaPredicted RBP7.55□□□□□ -1.2
PTPRE-202ENST00000306042 DLX1P56177 255 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 HIST2H2BCQ6DN03 193 aa7.55□□□□□ -1.2
PTPRE-202ENST00000306042 ZNF585BQ52M93 769 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 DGAT2L7PQ6IED9 249 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 DPPA3Q6W0C5 159 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 ZNF383Q8NA42 475 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 TMEM167AQ8TBQ9 72 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 USMG5Q96IX5 58 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 FAM90A9PA6NNJ1 464 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 SPANXN1Q5VSR9 72 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 ST6GAL2Q96JF0 529 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 SLC35B3Q9H1N7 401 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 RAB19A4D1S5 217 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 EREGO14944 169 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 IGFBP2P18065 325 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 C1orf122Q6ZSJ8 110 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 STHQ8IWL8 128 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 OR10W1Q8NGF6 305 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 OR1P1Q8NH06 330 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 TMEM204Q9BSN7 226 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 MEOX2P50222 304 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 QRFPP83859 136 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 FABP9Q0Z7S8 132 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 PVRIGQ6DKI7 326 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 LIME1Q9H400 295 aa7.54□□□□□ -1.2
PTPRE-202ENST00000306042 MBNL3Q9NUK0 354 aaKnown RBP7.54□□□□□ -1.2
PTPRE-202ENST00000306042 FAM181BA6NEQ2 426 aa7.53□□□□□ -1.2
PTPRE-202ENST00000306042 ITGB1BP1O14713 200 aa7.53□□□□□ -1.2
PTPRE-202ENST00000306042 USF2Q15853 346 aaPredicted RBP7.53□□□□□ -1.2
PTPRE-202ENST00000306042 DEFB112Q30KQ8 113 aa7.53□□□□□ -1.2
PTPRE-202ENST00000306042 C5orf24Q7Z6I8 188 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms