RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 RUSC1-AS1Q66K80 236 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 C15orf54Q8N8G6 183 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 TEX45Q8NA69 505 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 HIST1H2BAQ96A08 127 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 RPEQ96AT9 228 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 TVP23CQ96ET8 276 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 NIPSNAP3BQ9BS92 247 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 SIGLEC9Q9Y336 463 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 ZFYVE26Q68DK2 2539 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 A0A1W2PPV4 95 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 M0R1W7 72 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 REG1AP05451 166 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 STAG3L2P0CL84 134 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 STAG3L3P0CL85 134 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 ARL14EPLP0DKL9 152 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 NPPCP23582 126 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 GATA2P23769 480 aaPredicted RBP5.25□□□□□ -1.57
USP47-201ENST00000305481 GPR6P46095 362 aaPredicted RBP5.25□□□□□ -1.57
USP47-201ENST00000305481 PSMB3P49720 205 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 ERHP84090 104 aaKnown RBP5.25□□□□□ -1.57
USP47-201ENST00000305481 TPTE2P1Q5T6R2 138 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 LHFPL4Q7Z7J7 247 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 MANBALQ9NQG1 85 aa5.25□□□□□ -1.57
USP47-201ENST00000305481 MRPL36Q9P0J6 103 aaKnown RBP5.25□□□□□ -1.57
USP47-201ENST00000305481 A0A1W2PN81 502 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 ODF3BA8MYP8 253 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 FCN1O00602 326 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 TIMM23O14925 209 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 FOXH1O75593 365 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 PRTN3P24158 256 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 CHRNA7P36544 502 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 TAGLN2P37802 199 aaKnown RBP5.24□□□□□ -1.57
USP47-201ENST00000305481 EFNA4P52798 201 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 MFAP2P55001 183 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 PAX2Q02962 417 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 C19orf35Q6ZS72 473 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 FAM24BQ8N5W8 94 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 SDF2L1Q9HCN8 221 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 DOPEY1Q5JWR5 2465 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 OVOL3O00110 214 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 IGHV3-48P01763 117 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 AREGP15514 252 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 OR10J1P30954 320 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 PVRIGQ6DKI7 326 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 SPNS3Q6ZMD2 512 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 SLC16A13Q7RTY0 426 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 CFHR4Q92496 578 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 AMMECR1Q9Y4X0 333 aaPredicted RBP5.24□□□□□ -1.57
USP47-201ENST00000305481 ZFHX3Q15911 3703 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 A0A087WWC5 75 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 IGHV2-5P01817 119 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 APELAP0DMC3 54 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 HTR1DP28221 377 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 GPX4P36969 197 aaPredicted RBP5.24□□□□□ -1.57
USP47-201ENST00000305481 COMPP49747 757 aaPredicted RBP5.24□□□□□ -1.57
USP47-201ENST00000305481 LGALS4P56470 323 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 UBE2G2P60604 165 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 PPP1R27Q86WC6 154 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 MMD2Q8IY49 270 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 OR51G1Q8NGK1 321 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 OR4F5Q8NH21 305 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 CACNG8Q8WXS5 425 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 OR4F4Q96R69 305 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 FBXL15Q9H469 300 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 DPM3Q9P2X0 92 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 METTL1Q9UBP6 276 aaKnown RBP5.24□□□□□ -1.57
USP47-201ENST00000305481 HILPDAQ9Y5L2 63 aa5.24□□□□□ -1.57
USP47-201ENST00000305481 CSMD2Q7Z408 3487 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 CACNA1BQ00975 2339 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 CRYBG3Q68DQ2 2970 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 A0A1W2PRD5 423 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 A0A1W2PRF3 423 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 A0A1W2PRM7 423 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 TEX22C9J3V5 150 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 TMEM250H0YL14 139 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 VENTXO95231 258 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 OR2C1O95371 312 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 FOLR2P14207 255 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 CD24P25063 80 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 ATP5G3P48201 142 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 MEOX2P50222 304 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 RAB31Q13636 194 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 HABP2Q14520 560 aaPredicted RBP5.23□□□□□ -1.57
USP47-201ENST00000305481 TNXAQ16473 311 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 C1orf122Q6ZSJ8 110 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 MIR17HGQ75NE6 70 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 DYNAPQ8N1N2 210 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 RNASEH2CQ8TDP1 164 aaKnown RBP5.23□□□□□ -1.57
USP47-201ENST00000305481 KCNIP2Q9NS61 270 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 DMRT1Q9Y5R6 373 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 IGKV1D-37A0A075B6S9 117 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 C11orf94C9JXX5 98 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 CXorf1O96002 111 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 MT-ND4LP03901 98 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 MAS1LP35410 378 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 LCN2P80188 198 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 ZNF343Q6P1L6 599 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 VMO1Q7Z5L0 202 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 TMEM37Q8WXS4 190 aa5.23□□□□□ -1.57
USP47-201ENST00000305481 RPUSD4Q96CM3 377 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms