RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 NPBWR1P48145 328 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 SUB1P53999 127 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 GPR107Q5VW38 600 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 WFDC3Q8IUB2 231 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 SLC35G3Q8N808 338 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 TMEM229BQ8NBD8 167 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 TMEM116Q8NCL8 245 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 TERB2Q8NHR7 220 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 GINS3Q9BRX5 216 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 COPZ2Q9P299 210 aa12.4□□□□□ -0.42
TRAPPC1-201ENST00000303731 TRAV14DV4A0A0A6YYC5 116 aa12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 IGHV7-4-1A0A0J9YVY3 117 aa12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 YIF1AO95070 293 aa12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 CD74P04233 296 aa12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 SMIM18P0DKX4 95 aa12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 DUSP18Q8NEJ0 188 aa12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 GALNT14Q96FL9 552 aa12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 RHPN1-AS1Q9BWJ2 59 aa12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 NAA50Q9GZZ1 169 aaKnown RBP12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 RABL2AQ9UBK7 228 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 UBQLN2Q9UHD9 624 aa12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 RABL2BQ9UNT1 228 aa12.39□□□□□ -0.43
TRAPPC1-201ENST00000303731 GABARAPH6UMI1 98 aa12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 CHEK1O14757 476 aa12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 SCGB2A1O75556 95 aa12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 IFNA17P01571 189 aa12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 CTSDP07339 412 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 P0C879 139 aa12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 MEF2DQ14814 521 aa12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 TRIM16LQ309B1 348 aa12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 RNASE12Q5GAN4 147 aaKnown RBP12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 GPR141Q7Z602 305 aa12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 STPG3Q8N7X2 389 aa12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 PINX1Q96BK5 328 aaKnown RBP12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 RRNAD1Q96FB5 475 aaKnown RBP12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 TP53RKQ96S44 253 aa12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 ABHD1Q96SE0 405 aa12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 MRPS26Q9BYN8 205 aaKnown RBP12.38□□□□□ -0.43
TRAPPC1-201ENST00000303731 IGHV3OR16-8A0A075B7F1 116 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 SPRY2O43597 315 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 ZNF207O43670 478 aaKnown RBP12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 RAB3DO95716 219 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 IGKV1-5P01602 117 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 ATF4P18848 351 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 PI3P19957 117 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 PPP5CP53041 499 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 PAFAH1B2P68402 229 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 TNFRSF9Q07011 255 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 STEAP1BQ6NZ63 245 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 RNF2Q99496 336 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 ENY2Q9NPA8 101 aa12.37□□□□□ -0.43
TRAPPC1-201ENST00000303731 A0A0B4J293 547 aa12.36□□□□□ -0.43
TRAPPC1-201ENST00000303731 RGS5O15539 181 aa12.36□□□□□ -0.43
TRAPPC1-201ENST00000303731 ST8SIA3O43173 380 aa12.36□□□□□ -0.43
TRAPPC1-201ENST00000303731 UCP1P25874 307 aa12.36□□□□□ -0.43
TRAPPC1-201ENST00000303731 SURF2Q15527 256 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC1-201ENST00000303731 SCGB2B2Q4G0G5 96 aa12.36□□□□□ -0.43
TRAPPC1-201ENST00000303731 PVRIGQ6DKI7 326 aa12.36□□□□□ -0.43
TRAPPC1-201ENST00000303731 OR13C8Q8NGS7 320 aa12.36□□□□□ -0.43
TRAPPC1-201ENST00000303731 RNASE11Q8TAA1 199 aaKnown RBP12.36□□□□□ -0.43
TRAPPC1-201ENST00000303731 C14orf166Q9Y224 244 aaKnown RBP12.36□□□□□ -0.43
TRAPPC1-201ENST00000303731 HOXA1P49639 335 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC1-201ENST00000303731 ZNF600Q6ZNG1 722 aa12.35□□□□□ -0.43
TRAPPC1-201ENST00000303731 TMEM217Q8N7C4 229 aa12.35□□□□□ -0.43
TRAPPC1-201ENST00000303731 OR4D10Q8NGI6 311 aa12.35□□□□□ -0.43
TRAPPC1-201ENST00000303731 RNF183Q96D59 192 aa12.35□□□□□ -0.43
TRAPPC1-201ENST00000303731 ZNF414Q96IQ9 312 aa12.35□□□□□ -0.43
TRAPPC1-201ENST00000303731 TMEM231Q9H6L2 316 aa12.35□□□□□ -0.43
TRAPPC1-201ENST00000303731 CACFD1Q9UGQ2 172 aa12.35□□□□□ -0.43
TRAPPC1-201ENST00000303731 DISC1C4P0D8 188 aa12.34□□□□□ -0.43
TRAPPC1-201ENST00000303731 IZUMO4Q1ZYL8 232 aa12.34□□□□□ -0.43
TRAPPC1-201ENST00000303731 DEFB135Q30KP9 77 aa12.34□□□□□ -0.43
TRAPPC1-201ENST00000303731 SPINK9Q5DT21 86 aa12.34□□□□□ -0.43
TRAPPC1-201ENST00000303731 MARCH1Q8TCQ1 289 aa12.34□□□□□ -0.43
TRAPPC1-201ENST00000303731 SMIM4Q8WVI0 70 aa12.34□□□□□ -0.43
TRAPPC1-201ENST00000303731 BCL7BQ9BQE9 202 aa12.34□□□□□ -0.43
TRAPPC1-201ENST00000303731 TMEM222Q9H0R3 208 aa12.34□□□□□ -0.43
TRAPPC1-201ENST00000303731 MAP6D1Q9H9H5 199 aa12.34□□□□□ -0.43
TRAPPC1-201ENST00000303731 TRAV2A0A0B4J234 112 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 NUPR2A6NF83 97 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 CTDSPLO15194 276 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 CDS2O95674 445 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 IGHV3-48P01763 117 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 RNASE2P10153 161 aaKnown RBP12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 RPL5P46777 297 aaKnown RBP12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 ALDH3B2P48448 385 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 SPCS3P61009 180 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 DHODHQ02127 395 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 AARDQ4LEZ3 155 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 FAM90A2PQ658T7 463 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 TOMM20LQ6UXN7 152 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 LYG2Q86SG7 212 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 RAB2BQ8WUD1 216 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 MIXL1Q9H2W2 232 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 VSIRQ9H7M9 311 aa12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC1-201ENST00000303731 PUS1Q9Y606 427 aaKnown RBP eCLIP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms