RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 DEFA4P12838 97 aa15.57■□□□□ 0.08
HOXC4-201ENST00000303406 LDLRAD2Q5SZI1 272 aa15.57■□□□□ 0.08
HOXC4-201ENST00000303406 CCDC144NLQ6NUI1 221 aa15.57■□□□□ 0.08
HOXC4-201ENST00000303406 IGFBPL1Q8WX77 278 aa15.57■□□□□ 0.08
HOXC4-201ENST00000303406 FAM122AQ96E09 287 aa15.57■□□□□ 0.08
HOXC4-201ENST00000303406 SMIM7Q9BQ49 75 aa15.57■□□□□ 0.08
HOXC4-201ENST00000303406 CTDSP1Q9GZU7 261 aa15.57■□□□□ 0.08
HOXC4-201ENST00000303406 TIMM23O14925 209 aa15.56■□□□□ 0.08
HOXC4-201ENST00000303406 CNTFRP26992 372 aa15.56■□□□□ 0.08
HOXC4-201ENST00000303406 GCHFRP30047 84 aa15.56■□□□□ 0.08
HOXC4-201ENST00000303406 TMEM241Q24JQ0 296 aa15.56■□□□□ 0.08
HOXC4-201ENST00000303406 NPBQ8NG41 125 aa15.56■□□□□ 0.08
HOXC4-201ENST00000303406 OR1P1Q8NH06 330 aa15.56■□□□□ 0.08
HOXC4-201ENST00000303406 MRPL32Q9BYC8 188 aaKnown RBP15.56■□□□□ 0.08
HOXC4-201ENST00000303406 PARLQ9H300 379 aa15.56■□□□□ 0.08
HOXC4-201ENST00000303406 NBEAQ8NFP9 2946 aa15.55■□□□□ 0.08
HOXC4-201ENST00000303406 NDUFS7O75251 213 aa15.55■□□□□ 0.08
HOXC4-201ENST00000303406 NDUFA3O95167 84 aa15.55■□□□□ 0.08
HOXC4-201ENST00000303406 SELENOTP62341 195 aa15.55■□□□□ 0.08
HOXC4-201ENST00000303406 PRB3Q04118 309 aaPredicted RBP15.55■□□□□ 0.08
HOXC4-201ENST00000303406 SIRPDQ9H106 197 aa15.55■□□□□ 0.08
HOXC4-201ENST00000303406 FNDC4Q9H6D8 234 aaPredicted RBP15.55■□□□□ 0.08
HOXC4-201ENST00000303406 SEPSECSQ9HD40 501 aaKnown RBP15.55■□□□□ 0.08
HOXC4-201ENST00000303406 IGHV2-70DA0A0C4DH43 119 aa15.54■□□□□ 0.08
HOXC4-201ENST00000303406 TEX22C9J3V5 150 aa15.54■□□□□ 0.08
HOXC4-201ENST00000303406 VMO1Q7Z5L0 202 aa15.54■□□□□ 0.08
HOXC4-201ENST00000303406 ISOC2Q96AB3 205 aa15.54■□□□□ 0.08
HOXC4-201ENST00000303406 TMEM167BQ9NRX6 74 aa15.54■□□□□ 0.08
HOXC4-201ENST00000303406 TECRQ9NZ01 308 aaKnown RBP15.54■□□□□ 0.08
HOXC4-201ENST00000303406 ZZEF1O43149 2961 aa15.54■□□□□ 0.08
HOXC4-201ENST00000303406 NBASA2RRP1 2371 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 TCRBV4S1A1TA0A5B7 111 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 MOSP00540 346 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 RAB5AP20339 215 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 ZFP36P26651 326 aaKnown RBP15.53■□□□□ 0.08
HOXC4-201ENST00000303406 RND2P52198 227 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 TAS2R45P59539 299 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 MLANAQ16655 118 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 FAM78BQ5VT40 261 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 PQLC2Q6ZP29 291 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 OR2T6Q8NHC8 308 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 FBXL15Q9H469 300 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 TBL2Q9Y4P3 447 aaKnown RBP15.53■□□□□ 0.08
HOXC4-201ENST00000303406 F11RQ9Y624 299 aaKnown RBP15.53■□□□□ 0.08
HOXC4-201ENST00000303406 NBR2O15453 112 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 AREGP15514 252 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 HOXB4P17483 251 aaPredicted RBP15.53■□□□□ 0.08
HOXC4-201ENST00000303406 PDLIM4P50479 330 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 RAB5BP61020 215 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 KLRD1Q13241 179 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 SPATA31B1PQ5VZV4 182 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 FAM24BQ8N5W8 94 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 OR1L4Q8NGR5 311 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 SRSF12Q8WXF0 261 aaKnown RBP15.53■□□□□ 0.08
HOXC4-201ENST00000303406 C22orf15Q8WYQ4 148 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 RPUSD4Q96CM3 377 aaKnown RBP15.53■□□□□ 0.08
HOXC4-201ENST00000303406 ACY3Q96HD9 319 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 DOK5Q9P104 306 aa15.53■□□□□ 0.08
HOXC4-201ENST00000303406 SMG1Q96Q15 3661 aaKnown RBP15.52■□□□□ 0.08
HOXC4-201ENST00000303406 ITPR1Q14643 2758 aa15.52■□□□□ 0.07
HOXC4-201ENST00000303406 PKD1L2Q7Z442 2459 aa15.52■□□□□ 0.07
HOXC4-201ENST00000303406 PSMB11A5LHX3 300 aa15.52■□□□□ 0.07
HOXC4-201ENST00000303406 C1orf196B1AJZ1 125 aa15.52■□□□□ 0.07
HOXC4-201ENST00000303406 LMO4P61968 165 aa15.52■□□□□ 0.07
HOXC4-201ENST00000303406 SSBP2P81877 361 aaPredicted RBP15.52■□□□□ 0.07
HOXC4-201ENST00000303406 EBI3Q14213 229 aa15.52■□□□□ 0.07
HOXC4-201ENST00000303406 OR2T10Q8NGZ9 312 aa15.52■□□□□ 0.07
HOXC4-201ENST00000303406 PFDN5Q99471 154 aa15.52■□□□□ 0.07
HOXC4-201ENST00000303406 POLR3KQ9Y2Y1 108 aaPredicted RBP15.52■□□□□ 0.07
HOXC4-201ENST00000303406 KALRNO60229 2985 aa15.52■□□□□ 0.07
HOXC4-201ENST00000303406 IGKV1D-37A0A075B6S9 117 aa15.51■□□□□ 0.07
HOXC4-201ENST00000303406 CLDN34H7C241 214 aa15.51■□□□□ 0.07
HOXC4-201ENST00000303406 ATP5G3P48201 142 aa15.51■□□□□ 0.07
HOXC4-201ENST00000303406 RPL23P62829 140 aaKnown RBP15.51■□□□□ 0.07
HOXC4-201ENST00000303406 SSX2Q16385 188 aa15.51■□□□□ 0.07
HOXC4-201ENST00000303406 CST9LP1Q5W188 147 aa15.51■□□□□ 0.07
HOXC4-201ENST00000303406 MIR17HGQ75NE6 70 aa15.51■□□□□ 0.07
HOXC4-201ENST00000303406 C1QL4Q86Z23 238 aa15.51■□□□□ 0.07
HOXC4-201ENST00000303406 OR1L6Q8NGR2 347 aa15.51■□□□□ 0.07
HOXC4-201ENST00000303406 NPIPB3Q92617 1050 aa15.51■□□□□ 0.07
HOXC4-201ENST00000303406 TRGV9Q99603 122 aa15.51■□□□□ 0.07
HOXC4-201ENST00000303406 KLF2Q9Y5W3 355 aaPredicted RBP15.51■□□□□ 0.07
HOXC4-201ENST00000303406 FOXH1O75593 365 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 C8orf88P0DMB2 117 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 NPPCP23582 126 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 MFAP2P55001 183 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 GNB1P62873 340 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 PLGLAQ15195 96 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 ELOBQ15370 118 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 MMDQ15546 238 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 ZNF674Q2M3X9 581 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 LHFPL4Q7Z7J7 247 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 TMEM116Q8NCL8 245 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 C11orf52Q96A22 123 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 EAF1Q96JC9 268 aaPredicted RBP15.5■□□□□ 0.07
HOXC4-201ENST00000303406 SPOCK3Q9BQ16 436 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 HILPDAQ9Y5L2 63 aa15.5■□□□□ 0.07
HOXC4-201ENST00000303406 TPRP12270 2363 aaKnown RBP15.5■□□□□ 0.07
HOXC4-201ENST00000303406 REG1AP05451 166 aa15.49■□□□□ 0.07
HOXC4-201ENST00000303406 BPIFB3P59826 476 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms