RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 C3orf56Q8N813 242 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 BSPH1Q075Z2 132 aa12.02□□□□□ -0.48
HIPK3-201ENST00000303296 ERCC8Q13216 396 aa12.02□□□□□ -0.48
HIPK3-201ENST00000303296 RSPO4Q2I0M5 234 aaPredicted RBP12.02□□□□□ -0.48
HIPK3-201ENST00000303296 DRAM1Q8N682 238 aa12.02□□□□□ -0.48
HIPK3-201ENST00000303296 ZNF721Q8TF20 911 aa12.02□□□□□ -0.48
HIPK3-201ENST00000303296 DNAJC30Q96LL9 226 aa12.02□□□□□ -0.48
HIPK3-201ENST00000303296 C4AP0C0L4 1744 aa12.02□□□□□ -0.48
HIPK3-201ENST00000303296 C4BP0C0L5 1744 aa12.02□□□□□ -0.48
HIPK3-201ENST00000303296 FAM27BQ5VT28 67 aa12.02□□□□□ -0.49
HIPK3-201ENST00000303296 SLC50A1Q9BRV3 221 aa12.02□□□□□ -0.49
HIPK3-201ENST00000303296 PTGDSP41222 190 aa12.02□□□□□ -0.49
HIPK3-201ENST00000303296 MAJINQ3KP22 176 aa12.02□□□□□ -0.49
HIPK3-201ENST00000303296 A8MXK9 166 aa12.02□□□□□ -0.49
HIPK3-201ENST00000303296 CA7P43166 264 aa12.02□□□□□ -0.49
HIPK3-201ENST00000303296 NANOS3P60323 173 aaKnown RBP12.02□□□□□ -0.49
HIPK3-201ENST00000303296 IMMP1LQ96LU5 166 aa12.02□□□□□ -0.49
HIPK3-201ENST00000303296 DTX4Q9Y2E6 619 aa12.02□□□□□ -0.49
HIPK3-201ENST00000303296 LRRK1Q38SD2 2015 aa12.01□□□□□ -0.49
HIPK3-201ENST00000303296 CHKB-CPT1BH3BT56 60 aa12.01□□□□□ -0.49
HIPK3-201ENST00000303296 TRAV13-1A0A0B4J241 112 aa12.01□□□□□ -0.49
HIPK3-201ENST00000303296 DUSP14O95147 198 aaKnown RBP12.01□□□□□ -0.49
HIPK3-201ENST00000303296 FAM27E3Q08E93 113 aa12.01□□□□□ -0.49
HIPK3-201ENST00000303296 CD300LDQ6UXZ3 194 aa12.01□□□□□ -0.49
HIPK3-201ENST00000303296 LCNL1Q6ZST4 164 aa12.01□□□□□ -0.49
HIPK3-201ENST00000303296 C2orf68Q2NKX9 166 aa12.01□□□□□ -0.49
HIPK3-201ENST00000303296 C1orf159Q96HA4 380 aa12.01□□□□□ -0.49
HIPK3-201ENST00000303296 ATP5G3P48201 142 aa12.01□□□□□ -0.49
HIPK3-201ENST00000303296 MIR17HGQ75NE6 70 aa12.01□□□□□ -0.49
HIPK3-201ENST00000303296 SPTBN2O15020 2390 aa12.01□□□□□ -0.49
HIPK3-201ENST00000303296 NKAPP1Q8N9T2 125 aa12□□□□□ -0.49
HIPK3-201ENST00000303296 TRGV11A0A075B6L2 103 aa12□□□□□ -0.49
HIPK3-201ENST00000303296 LOC102723996A0A087X1L8 192 aa12□□□□□ -0.49
HIPK3-201ENST00000303296 ACTL10Q5JWF8 245 aa12□□□□□ -0.49
HIPK3-201ENST00000303296 ZNF479Q96JC4 524 aa12□□□□□ -0.49
HIPK3-201ENST00000303296 TIAM2Q8IVF5 1701 aa12□□□□□ -0.49
HIPK3-201ENST00000303296 CFHR3Q02985 330 aa12□□□□□ -0.49
HIPK3-201ENST00000303296 ZNF876PQ49A33 203 aa12□□□□□ -0.49
HIPK3-201ENST00000303296 CASP8AP2Q9UKL3 1982 aa12□□□□□ -0.49
HIPK3-201ENST00000303296 CACNA1GO43497 2377 aa12□□□□□ -0.49
HIPK3-201ENST00000303296 FXYD1O00168 92 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 IGLV3-25P01717 112 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 PRR31Q5SQ13 230 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 ZIC4Q8N9L1 334 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 IFI27L2Q9H2X8 130 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 DMRT1Q9Y5R6 373 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 ZNF561-AS1K7EIQ3 104 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 ATP5L2Q7Z4Y8 100 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 GATAD1Q8WUU5 269 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 TMEM174Q8WUU8 243 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 SLC25A28Q96A46 364 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 ADMP35318 185 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 ZP1P60852 638 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 ORMDL2Q53FV1 153 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 BAALCQ8WXS3 180 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 WDYHV1Q96HA8 205 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 ASCL2Q99929 193 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 A0A1W2PPC1 479 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 SS18Q15532 418 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 DMRTC2Q8IXT2 367 aaPredicted RBP11.99□□□□□ -0.49
HIPK3-201ENST00000303296 SMIM8Q96KF7 97 aa11.99□□□□□ -0.49
HIPK3-201ENST00000303296 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.99□□□□□ -0.497e-8■■■□□ 16.4
HIPK3-201ENST00000303296 IZUMO1RA6ND01 250 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 TMEM238C9JI98 176 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 DUSP15Q9H1R2 295 aaPredicted RBP11.98□□□□□ -0.49
HIPK3-201ENST00000303296 DEFB130BP0DP73 79 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 DEFB130AP0DP74 79 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 PILRBQ9UKJ0 227 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 RHOGP84095 191 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 C9orf153Q5TBE3 101 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 CIARTQ8N365 385 aaPredicted RBP11.98□□□□□ -0.49
HIPK3-201ENST00000303296 TRAV40A0A0B4J280 105 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 C8orf82Q6P1X6 216 aaPredicted RBP11.98□□□□□ -0.49
HIPK3-201ENST00000303296 TMEM219Q86XT9 240 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 FAM90A26D6RGX4 464 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 SIGLEC15Q6ZMC9 328 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 SVIPQ8NHG7 77 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 ABHD17AQ96GS6 310 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 TPTE2P1Q5T6R2 138 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 DEFB105AQ8NG35 78 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 SRXN1Q9BYN0 137 aa11.98□□□□□ -0.49
HIPK3-201ENST00000303296 UMODP07911 640 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 CISD3P0C7P0 127 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 FAM209AQ5JX71 171 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 NEU4Q8WWR8 484 aaPredicted RBP11.97□□□□□ -0.49
HIPK3-201ENST00000303296 SIGLEC12Q96PQ1 595 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 LRRC37A3O60309 1634 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 F8VVB4 439 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 F8VWA3 439 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 OR5P3Q8WZ94 311 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 IGHG3P01860 377 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 HAMPP81172 84 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 ZIC1Q15915 447 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 TEX43Q6ZNM6 134 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 RSPO3Q9BXY4 272 aaPredicted RBP11.97□□□□□ -0.49
HIPK3-201ENST00000303296 TCRBV5S1A1TA0A578 114 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 SEC11AP67812 179 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 LAGE3Q14657 143 aa11.97□□□□□ -0.49
HIPK3-201ENST00000303296 ZXDCQ2QGD7 858 aaPredicted RBP11.97□□□□□ -0.49
HIPK3-201ENST00000303296 KNDC1Q76NI1 1749 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms