RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 PITPNC1Q9UKF7 332 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 TIMM9Q9Y5J7 89 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 FLNAP21333 2647 aaKnown RBP10.28□□□□□ -0.76
CCDC7-202ENST00000302316 A6NDX4 124 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 SH2D7A6NKC9 451 aaPredicted RBP10.28□□□□□ -0.76
CCDC7-202ENST00000302316 C17orf112F2Z3M2 114 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 TEX46H3BTG2 121 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 TRIM77I1YAP6 450 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 MPDU1O75352 247 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 DEFA4P12838 97 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 CTRB1P17538 263 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 FHITP49789 147 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 ZNF616Q08AN1 781 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 PXDC1Q5TGL8 231 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 CTRB2Q6GPI1 263 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 COMMD7Q86VX2 200 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 FAM213BQ8TBF2 198 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 CACNG8Q8WXS5 425 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 SLC35E1Q96K37 410 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 PARP11Q9NR21 331 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 PFDN2Q9UHV9 154 aa10.28□□□□□ -0.76
CCDC7-202ENST00000302316 CORTO00230 105 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 GPX4P36969 197 aaPredicted RBP10.27□□□□□ -0.77
CCDC7-202ENST00000302316 ELLP55199 621 aaPredicted RBP10.27□□□□□ -0.77
CCDC7-202ENST00000302316 BLOC1S1P78537 153 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 SERF2P84101 59 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 GAMTQ14353 236 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 MLANAQ16655 118 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 PVRIGQ6DKI7 326 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 TEPPQ6URK8 271 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 C9orf139Q6ZV77 190 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 WNT10AQ9GZT5 417 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 FNDC4Q9H6D8 234 aaPredicted RBP10.27□□□□□ -0.77
CCDC7-202ENST00000302316 ZNF469Q96JG9 3925 aaPredicted RBP10.27□□□□□ -0.77
CCDC7-202ENST00000302316 CSPG4Q6UVK1 2322 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 ASPHD1Q5U4P2 390 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 CENPVQ7Z7K6 275 aaPredicted RBP10.27□□□□□ -0.77
CCDC7-202ENST00000302316 LFNGQ8NES3 379 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 ACY3Q96HD9 319 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 MGST2Q99735 147 aa10.27□□□□□ -0.77
CCDC7-202ENST00000302316 LSM4Q9Y4Z0 139 aaKnown RBP10.27□□□□□ -0.77
CCDC7-202ENST00000302316 TEX15Q9BXT5 2789 aa10.26□□□□□ -0.77
CCDC7-202ENST00000302316 NPIPB5A8MRT5 1133 aa10.26□□□□□ -0.77
CCDC7-202ENST00000302316 IGHV4-59P01825 116 aa10.26□□□□□ -0.77
CCDC7-202ENST00000302316 ETFRF1Q6IPR1 90 aa10.26□□□□□ -0.77
CCDC7-202ENST00000302316 TMEM144Q7Z5S9 345 aa10.26□□□□□ -0.77
CCDC7-202ENST00000302316 TEX29Q8N6K0 151 aa10.26□□□□□ -0.77
CCDC7-202ENST00000302316 OR2T6Q8NHC8 308 aa10.26□□□□□ -0.77
CCDC7-202ENST00000302316 GGTLC1Q9BX51 225 aa10.26□□□□□ -0.77
CCDC7-202ENST00000302316 VSIRQ9H7M9 311 aa10.26□□□□□ -0.77
CCDC7-202ENST00000302316 DMRT1Q9Y5R6 373 aa10.26□□□□□ -0.77
CCDC7-202ENST00000302316 ATP6V0E1O15342 81 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 IGHV3-48P01763 117 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 AMY1AP04745 511 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 EGR2P11161 476 aaPredicted RBP10.25□□□□□ -0.77
CCDC7-202ENST00000302316 RAB31Q13636 194 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 ECSCRQ19T08 205 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 FFAR4Q5NUL3 377 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 ACSM6Q6P461 480 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 SPNS3Q6ZMD2 512 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 OR1L6Q8NGR2 347 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 SGMS2Q8NHU3 365 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 CITED4Q96RK1 184 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 HRH4Q9H3N8 390 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 MED9Q9NWA0 146 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 M0QZK8 103 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 AGPAT2O15120 278 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 CRYGCP07315 174 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 TMEM41BQ5BJD5 291 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 C9orf152Q5JTZ5 239 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 DPPA3Q6W0C5 159 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 IL17RELQ6ZVW7 336 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 C16orf82Q7Z2V1 217 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 TTC9CQ8N5M4 171 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 KCNIP2Q9NS61 270 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 RPRMQ9NS64 109 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 ZFHX3Q15911 3703 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 AKAP9Q99996 3911 aa10.25□□□□□ -0.77
CCDC7-202ENST00000302316 IGHV3-21A0A0B4J1V1 117 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 BTBD17A6NE02 478 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 CD5LO43866 347 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 MT-CO2P00403 227 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 IER3P46695 156 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 RAB2AP61019 212 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 KRTAP1-1Q07627 177 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 OR5R1Q8NH85 324 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 ZNF48Q96MX3 618 aaPredicted RBP10.24□□□□□ -0.77
CCDC7-202ENST00000302316 TMUB1Q9BVT8 246 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 PXMP4Q9Y6I8 212 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 IGKV1OR2-108A0A075B7D4 117 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 MBP02144 154 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 RND2P52198 227 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 MIC13Q5XKP0 118 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 UNQ5815/PRO19632Q6UWF5 114 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 OR5T1Q8NG75 326 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 TNFRSF19Q9NS68 423 aa10.24□□□□□ -0.77
CCDC7-202ENST00000302316 MRPL36Q9P0J6 103 aaKnown RBP10.24□□□□□ -0.77
CCDC7-202ENST00000302316 LINC01548A6NM66 108 aa10.23□□□□□ -0.77
CCDC7-202ENST00000302316 CYB5BO43169 146 aa10.23□□□□□ -0.77
CCDC7-202ENST00000302316 SOX15O60248 233 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms