RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 OR10W1Q8NGF6 305 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 NPIPB3Q92617 1050 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 ACACBO00763 2458 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 CT45A6P0DMU7 189 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 CT45A5P0DMU8 189 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 CT45A7P0DMV0 189 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 CEACAM8P31997 349 aaPredicted RBP11.66□□□□□ -0.54
SDC2-201ENST00000302190 CT45A1Q5HYN5 189 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 IBA57Q5T440 356 aaKnown RBP11.66□□□□□ -0.54
SDC2-201ENST00000302190 CT45A3Q8NHU0 189 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 SNRNP40Q96DI7 357 aaKnown RBP11.66□□□□□ -0.54
SDC2-201ENST00000302190 SLC25A10Q9UBX3 287 aaPredicted RBP11.66□□□□□ -0.54
SDC2-201ENST00000302190 ZFP30Q9Y2G7 519 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 S4R3C0 116 aa11.66□□□□□ -0.54
SDC2-201ENST00000302190 TM4SF5O14894 197 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 DUTP33316 252 aaKnown RBP11.65□□□□□ -0.54
SDC2-201ENST00000302190 RBX1P62877 108 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 C10orf55Q5SWW7 151 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 TMEM108Q6UXF1 575 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 TMEM14EPQ6UXP3 125 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 CD177Q8N6Q3 437 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 KIR3DL3Q8N743 410 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 OR1L4Q8NGR5 311 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 AP1S3Q96PC3 154 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 ZFYVE26Q68DK2 2539 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 TRBV24-1A0A075B6N3 115 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 RND2P52198 227 aa11.65□□□□□ -0.54
SDC2-201ENST00000302190 IQCF6A8MYZ5 107 aa11.65□□□□□ -0.55
SDC2-201ENST00000302190 SERF1AO75920 110 aa11.65□□□□□ -0.55
SDC2-201ENST00000302190 ADMP35318 185 aa11.65□□□□□ -0.55
SDC2-201ENST00000302190 SRP14P37108 136 aaKnown RBP11.65□□□□□ -0.55
SDC2-201ENST00000302190 ZNF146Q15072 292 aa11.65□□□□□ -0.55
SDC2-201ENST00000302190 MORN2Q502X0 79 aa11.65□□□□□ -0.55
SDC2-201ENST00000302190 LRRC10Q5BKY1 277 aa11.65□□□□□ -0.55
SDC2-201ENST00000302190 TREML4Q6UXN2 200 aa11.65□□□□□ -0.55
SDC2-201ENST00000302190 OR9G1Q8NH87 305 aa11.65□□□□□ -0.55
SDC2-201ENST00000302190 RNF138Q8WVD3 245 aa11.65□□□□□ -0.55
SDC2-201ENST00000302190 SCRT1Q9BWW7 348 aa11.65□□□□□ -0.55
SDC2-201ENST00000302190 TMEM167BQ9NRX6 74 aa11.65□□□□□ -0.55
SDC2-201ENST00000302190 PCSK5Q92824 1860 aa11.64□□□□□ -0.55
SDC2-201ENST00000302190 TGIF2LYQ8IUE0 185 aa11.64□□□□□ -0.55
SDC2-201ENST00000302190 M0R2Z0 102 aa11.64□□□□□ -0.55
SDC2-201ENST00000302190 LINC01551Q86U37 167 aa11.64□□□□□ -0.55
SDC2-201ENST00000302190 OR2T6Q8NHC8 308 aa11.64□□□□□ -0.55
SDC2-201ENST00000302190 PRNDQ9UKY0 176 aa11.64□□□□□ -0.55
SDC2-201ENST00000302190 POLR3KQ9Y2Y1 108 aaPredicted RBP11.64□□□□□ -0.55
SDC2-201ENST00000302190 SAA2-SAA4A0A096LPE2 208 aa11.64□□□□□ -0.55
SDC2-201ENST00000302190 IGHV3-35A0A0C4DH35 117 aa11.64□□□□□ -0.55
SDC2-201ENST00000302190 SAA2P0DJI9 122 aaPredicted RBP11.64□□□□□ -0.55
SDC2-201ENST00000302190 TIMP3P35625 211 aa11.64□□□□□ -0.55
SDC2-201ENST00000302190 GPR6P46095 362 aaPredicted RBP11.64□□□□□ -0.55
SDC2-201ENST00000302190 ERASQ7Z444 233 aa11.64□□□□□ -0.55
SDC2-201ENST00000302190 PIP4P1Q86T03 277 aa11.64□□□□□ -0.55
SDC2-201ENST00000302190 A0A1B0GW64 132 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 DUX4L9Q6RFH8 374 aaPredicted RBP11.63□□□□□ -0.55
SDC2-201ENST00000302190 ZNF114Q8NC26 417 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 ALKBH7Q9BT30 221 aaPredicted RBP11.63□□□□□ -0.55
SDC2-201ENST00000302190 CSPG4Q6UVK1 2322 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 TRAV5A0A0B4J249 113 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 FAM90A27PA6NNH2 459 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 ACSF3Q4G176 576 aaPredicted RBP11.63□□□□□ -0.55
SDC2-201ENST00000302190 C10orf113Q5VZT2 155 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 PDPNQ86YL7 162 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 MIEN1Q9BRT3 115 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 WDR83OSQ9Y284 106 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 PPIAL4AQ9Y536 164 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 VMA21Q3ZAQ7 101 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 NCOR1P1Q9H4R4 102 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 ONECUT1Q9UBC0 465 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 JPT1Q9UK76 154 aa11.63□□□□□ -0.55
SDC2-201ENST00000302190 C15orf62A8K5M9 175 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 MPDU1O75352 247 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 KIR2DL2P43627 348 aaPredicted RBP11.62□□□□□ -0.55
SDC2-201ENST00000302190 RPRMLQ8N4K4 120 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 PAXXQ9BUH6 204 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 PARD6GQ9BYG4 376 aaPredicted RBP11.62□□□□□ -0.55
SDC2-201ENST00000302190 TRAV1-1A0A0B4J248 108 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 PYYP10082 97 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 EFNB3Q15768 340 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 OR1L8Q8NGR8 309 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 GGTLC1Q9BX51 225 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 IGHV1-18A0A0C4DH31 117 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 PGPA6NDG6 321 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 NCBP2LA6PVI3 153 aaKnown RBP11.62□□□□□ -0.55
SDC2-201ENST00000302190 ZNF891A8MT65 544 aaPredicted RBP11.62□□□□□ -0.55
SDC2-201ENST00000302190 CIDEAO60543 219 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 APCSP02743 223 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 HINT1P49773 126 aaPredicted RBP11.62□□□□□ -0.55
SDC2-201ENST00000302190 RPL8P62917 257 aaKnown RBP11.62□□□□□ -0.55
SDC2-201ENST00000302190 SSBP4Q9BWG4 385 aaPredicted RBP11.62□□□□□ -0.55
SDC2-201ENST00000302190 TIMM9Q9Y5J7 89 aa11.62□□□□□ -0.55
SDC2-201ENST00000302190 GFRA3O60609 400 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 COL8A2P25067 703 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 CDKN1BP46527 198 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 DLX1P56177 255 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 TMEM170AQ8WVE7 144 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 LINC00479Q96M42 142 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 NBL1P41271 181 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 NHLH1Q02575 133 aa11.61□□□□□ -0.55
SDC2-201ENST00000302190 FAM222BQ8WU58 562 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms