RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 MRPL52Q86TS9 123 aaKnown RBP13.8□□□□□ -0.2
SNAPC4-201ENST00000298532 SCN8AQ9UQD0 1980 aa13.8□□□□□ -0.2
SNAPC4-201ENST00000298532 GPX1P07203 203 aa13.8□□□□□ -0.2
SNAPC4-201ENST00000298532 CLEC7AQ9BXN2 247 aa13.8□□□□□ -0.2
SNAPC4-201ENST00000298532 ZFP36L1Q07352 338 aaKnown RBP13.8□□□□□ -0.2
SNAPC4-201ENST00000298532 ORAOV1Q8WV07 137 aa13.8□□□□□ -0.2
SNAPC4-201ENST00000298532 GBF1Q92538 1859 aa13.8□□□□□ -0.2
SNAPC4-201ENST00000298532 RFPL3SP0C7P2 107 aa13.8□□□□□ -0.2
SNAPC4-201ENST00000298532 Q6ZT83 130 aa13.8□□□□□ -0.2
SNAPC4-201ENST00000298532 OR2K2Q8NGT1 345 aa13.8□□□□□ -0.2
SNAPC4-201ENST00000298532 WBP1Q96G27 269 aa13.8□□□□□ -0.2
SNAPC4-201ENST00000298532 PPP1R17O96001 155 aa13.79□□□□□ -0.2
SNAPC4-201ENST00000298532 TMEM170BQ5T4T1 132 aa13.79□□□□□ -0.2
SNAPC4-201ENST00000298532 PPIAL4CA0A0B4J2A2 164 aa13.79□□□□□ -0.2
SNAPC4-201ENST00000298532 TM4SF5O14894 197 aa13.79□□□□□ -0.2
SNAPC4-201ENST00000298532 PPIAL4GP0DN37 164 aa13.79□□□□□ -0.2
SNAPC4-201ENST00000298532 CHCHD1Q96BP2 118 aaKnown RBP13.79□□□□□ -0.2
SNAPC4-201ENST00000298532 Q9H3A6 140 aa13.79□□□□□ -0.2
SNAPC4-201ENST00000298532 TSPAN13O95857 204 aa13.79□□□□□ -0.2
SNAPC4-201ENST00000298532 FDCSPQ8NFU4 85 aa13.79□□□□□ -0.2
SNAPC4-201ENST00000298532 NTN3O00634 580 aaPredicted RBP13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 TYMSP04818 313 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 CFHR1Q03591 330 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 SCGB3A1Q96QR1 104 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 TDRD6O60522 2096 aaKnown RBP13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 KBTBD11-OT1A0A1B0GTJ5 212 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 LYL1P12980 280 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 ACTL10Q5JWF8 245 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 NPPCP23582 126 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 EFNB3Q15768 340 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 LINC01551Q86U37 167 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 C10orf126Q8N4M7 172 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 SRSF7Q16629 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 Q5PR19 223 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 FER1L6-AS1Q8NA97 138 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 SIGMAR1Q99720 223 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 TIMP4Q99727 224 aa13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 NHP2Q9NX24 153 aaKnown RBP13.78□□□□□ -0.2
SNAPC4-201ENST00000298532 DYNLRB2Q8TF09 96 aa13.77□□□□□ -0.2
SNAPC4-201ENST00000298532 C15orf61A6NNL5 157 aa13.77□□□□□ -0.21
SNAPC4-201ENST00000298532 TIMM23BQ5SRD1 257 aa13.77□□□□□ -0.21
SNAPC4-201ENST00000298532 ZNF497Q6ZNH5 498 aa13.77□□□□□ -0.21
SNAPC4-201ENST00000298532 AGMATQ9BSE5 352 aa13.77□□□□□ -0.21
SNAPC4-201ENST00000298532 DCTN5Q9BTE1 182 aa13.77□□□□□ -0.21
SNAPC4-201ENST00000298532 MS4A6AQ9H2W1 248 aa13.77□□□□□ -0.21
SNAPC4-201ENST00000298532 OTORQ9NRC9 128 aa13.77□□□□□ -0.21
SNAPC4-201ENST00000298532 DEPPQ9NTK1 212 aa13.77□□□□□ -0.21
SNAPC4-201ENST00000298532 ZNF664Q8N3J9 261 aa13.77□□□□□ -0.21
SNAPC4-201ENST00000298532 RAMP3O60896 148 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 HBDP02042 147 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 ATP5L2Q7Z4Y8 100 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 EPDR1Q9UM22 224 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 MGAMO43451 1857 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 TMEM50AO95807 157 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 PF4V1P10720 104 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 GLRXP35754 106 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 GCSAMLQ5JQS6 135 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 FAM90A1Q86YD7 464 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 GEMIN7Q9H840 131 aaKnown RBP13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 APOMO95445 188 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 TSPOP30536 169 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 PSG7Q13046 419 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 SCN5AQ14524 2016 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 RIPPLY3P57055 190 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 TMEM256Q8N2U0 113 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 RPP25LQ8N5L8 163 aaKnown RBP13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 FLVCR1-AS1Q8TAF5 88 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 TSKUQ8WUA8 353 aa13.76□□□□□ -0.21
SNAPC4-201ENST00000298532 UPK2O00526 184 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 YPEL1O60688 119 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 YPEL2Q96QA6 119 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 DOCK4Q8N1I0 1966 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 FAM90A9PA6NNJ1 464 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 NMSQ5H8A3 153 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 ABHD17AQ96GS6 310 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 PATJQ8NI35 1801 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 IGLV3-12A0A075B6K2 115 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 MUC21A0A0G2JKD1 596 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 MUC21A0A140T8X8 626 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 GZMBP10144 247 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 HSD52Q0P140 79 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 ZNF56Q15929 161 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 MEIG1Q5JSS6 88 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 RNFT1Q5M7Z0 435 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 MUC21Q5SSG8 566 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 MRPL14Q6P1L8 145 aaKnown RBP13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 GNG5P63218 68 aa13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 NYNRINQ9P2P1 1898 aaKnown RBP13.75□□□□□ -0.21
SNAPC4-201ENST00000298532 IQCF6A8MYZ5 107 aa13.74□□□□□ -0.21
SNAPC4-201ENST00000298532 FAM74A4Q5TZK3 123 aa13.74□□□□□ -0.21
SNAPC4-201ENST00000298532 NUDT11Q96G61 164 aa13.74□□□□□ -0.21
SNAPC4-201ENST00000298532 MRPS16Q9Y3D3 137 aaKnown RBP13.74□□□□□ -0.21
SNAPC4-201ENST00000298532 RNF115Q9Y4L5 304 aa13.74□□□□□ -0.21
SNAPC4-201ENST00000298532 LCTP09848 1927 aa13.74□□□□□ -0.21
SNAPC4-201ENST00000298532 MTCL1Q9Y4B5 1905 aaKnown RBP13.74□□□□□ -0.21
SNAPC4-201ENST00000298532 IGLV3-32A0A0A0MS00 114 aa13.74□□□□□ -0.21
SNAPC4-201ENST00000298532 LPAR2Q9HBW0 351 aa13.74□□□□□ -0.21
SNAPC4-201ENST00000298532 IGKV1-12A0A0C4DH73 117 aa13.74□□□□□ -0.21
SNAPC4-201ENST00000298532 C9JCJ5 164 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 261.1 ms