RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 VHLLQ6RSH7 139 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 DKK4Q9UBT3 224 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 HCFC1P51610 2035 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 BMPR1BO00238 502 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 CXorf1O96002 111 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 IGKV3-15P01624 115 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 CX3CL1P78423 397 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 MSMPQ1L6U9 139 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 GNG12Q9UBI6 72 aa12.82□□□□□ -0.36
UBAP1-201ENST00000297661 ZNF891A8MT65 544 aaPredicted RBP12.81□□□□□ -0.36
UBAP1-201ENST00000297661 J3QW42 95 aa12.81□□□□□ -0.36
UBAP1-201ENST00000297661 K7EM74 188 aa12.81□□□□□ -0.36
UBAP1-201ENST00000297661 FAM201AQ5SY85 155 aa12.81□□□□□ -0.36
UBAP1-201ENST00000297661 ZNRF1Q8ND25 227 aa12.81□□□□□ -0.36
UBAP1-201ENST00000297661 TRAV9-2A0A087WT02 112 aa12.81□□□□□ -0.36
UBAP1-201ENST00000297661 TRAV3A0A0B4J244 114 aa12.81□□□□□ -0.36
UBAP1-201ENST00000297661 C9JCJ5 164 aa12.81□□□□□ -0.36
UBAP1-201ENST00000297661 PSG1P11464 419 aa12.81□□□□□ -0.36
UBAP1-201ENST00000297661 IGLL1P15814 213 aa12.81□□□□□ -0.36
UBAP1-201ENST00000297661 RHOGP84095 191 aa12.81□□□□□ -0.36
UBAP1-201ENST00000297661 CSTL1Q9H114 145 aa12.81□□□□□ -0.36
UBAP1-201ENST00000297661 C15orf62A8K5M9 175 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 FAM87AP0C7U9 286 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 PRDX2P32119 198 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 TCL1AP56279 114 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 RELBQ01201 579 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 SMIM21Q3B7S5 101 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 ZBTB34Q8NCN2 500 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 ZNF439Q8NDP4 499 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 CORO2AQ92828 525 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 PLCE1Q9P212 2302 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 K7ENP7 123 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 GPR12P47775 334 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 Q56UQ5 140 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 Q8TCH9 128 aa12.8□□□□□ -0.36
UBAP1-201ENST00000297661 ADGRG4Q8IZF6 3080 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 IGSF10Q6WRI0 2623 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 C15orf65H3BRN8 121 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 M0R1X1 148 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 RAB29O14966 203 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 RHOBP62745 196 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 PDLIM3Q53GG5 364 aaPredicted RBP12.79□□□□□ -0.36
UBAP1-201ENST00000297661 MIC13Q5XKP0 118 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 MRPL54Q6P161 138 aaKnown RBP12.79□□□□□ -0.36
UBAP1-201ENST00000297661 OR4P4Q8NGL7 312 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 NCOR1P1Q9H4R4 102 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 ZNF71Q9NQZ8 489 aaPredicted RBP12.79□□□□□ -0.36
UBAP1-201ENST00000297661 TRGV10A0A0A0MS01 117 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 SPINT2O43291 252 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 ZNF134P52741 427 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 TMPRSS3P57727 454 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 FXYD3Q14802 87 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 LRRC10Q5BKY1 277 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 TAAR6Q96RI8 345 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 RNASE7Q9H1E1 156 aaKnown RBP12.79□□□□□ -0.36
UBAP1-201ENST00000297661 TP73-AS1Q9UF72 201 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 LY96Q9Y6Y9 160 aa12.79□□□□□ -0.36
UBAP1-201ENST00000297661 IGKV1D-17A0A075B6S4 117 aa12.78□□□□□ -0.36
UBAP1-201ENST00000297661 GCHFRP30047 84 aa12.78□□□□□ -0.36
UBAP1-201ENST00000297661 OPRK1P41145 380 aa12.78□□□□□ -0.36
UBAP1-201ENST00000297661 PRAMEF5Q5TYX0 476 aa12.78□□□□□ -0.36
UBAP1-201ENST00000297661 C1orf229Q6ZS94 237 aaPredicted RBP12.78□□□□□ -0.36
UBAP1-201ENST00000297661 ABHD12Q8N2K0 398 aa12.78□□□□□ -0.36
UBAP1-201ENST00000297661 MRPL27Q9P0M9 148 aaKnown RBP12.78□□□□□ -0.36
UBAP1-201ENST00000297661 RALYQ9UKM9 306 aaKnown RBP12.78□□□□□ -0.36
UBAP1-201ENST00000297661 TMEM11P17152 192 aa12.78□□□□□ -0.36
UBAP1-201ENST00000297661 GUSBP1Q15486 140 aa12.78□□□□□ -0.36
UBAP1-201ENST00000297661 DOLPP1Q86YN1 238 aa12.78□□□□□ -0.36
UBAP1-201ENST00000297661 ZNF596Q8TC21 504 aa12.78□□□□□ -0.36
UBAP1-201ENST00000297661 C11orf52Q96A22 123 aa12.78□□□□□ -0.36
UBAP1-201ENST00000297661 H0YJW9 148 aa12.77□□□□□ -0.36
UBAP1-201ENST00000297661 HLA-DQA1P01909 254 aa12.77□□□□□ -0.36
UBAP1-201ENST00000297661 AMY1AP04745 511 aa12.77□□□□□ -0.36
UBAP1-201ENST00000297661 DUTP33316 252 aaKnown RBP12.77□□□□□ -0.36
UBAP1-201ENST00000297661 RPS20P60866 119 aaKnown RBP12.77□□□□□ -0.36
UBAP1-201ENST00000297661 MPV17L2Q567V2 206 aa12.77□□□□□ -0.36
UBAP1-201ENST00000297661 OR4A47Q6IF82 309 aa12.77□□□□□ -0.36
UBAP1-201ENST00000297661 TREML4Q6UXN2 200 aa12.77□□□□□ -0.36
UBAP1-201ENST00000297661 TET2Q6N021 2002 aaPredicted RBP12.77□□□□□ -0.37
UBAP1-201ENST00000297661 LOC102724200A0A096LPH7 203 aaPredicted RBP12.77□□□□□ -0.37
UBAP1-201ENST00000297661 TAX1BP3O14907 124 aa12.77□□□□□ -0.37
UBAP1-201ENST00000297661 IGHG3P01860 377 aa12.77□□□□□ -0.37
UBAP1-201ENST00000297661 GNG4P50150 75 aa12.77□□□□□ -0.37
UBAP1-201ENST00000297661 SELENOVP59797 346 aa12.77□□□□□ -0.37
UBAP1-201ENST00000297661 COX19Q49B96 90 aa12.77□□□□□ -0.37
UBAP1-201ENST00000297661 CENPWQ5EE01 88 aa12.77□□□□□ -0.37
UBAP1-201ENST00000297661 EBLN2Q6P2I7 272 aa12.77□□□□□ -0.37
UBAP1-201ENST00000297661 DUX4L9Q6RFH8 374 aaPredicted RBP12.77□□□□□ -0.37
UBAP1-201ENST00000297661 SLC24A4Q8NFF2 622 aa12.77□□□□□ -0.37
UBAP1-201ENST00000297661 NEUROG1Q92886 237 aa12.77□□□□□ -0.37
UBAP1-201ENST00000297661 HSD17B10Q99714 261 aaKnown RBP12.77□□□□□ -0.37
UBAP1-201ENST00000297661 MGST2Q99735 147 aa12.77□□□□□ -0.37
UBAP1-201ENST00000297661 HEYLQ9NQ87 328 aaPredicted RBP12.77□□□□□ -0.37
UBAP1-201ENST00000297661 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
UBAP1-201ENST00000297661 SPRY3O43610 288 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 MYOD1P15172 320 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 SPATA31B1PQ5VZV4 182 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 C18orf32Q8TCD1 76 aa12.76□□□□□ -0.37
UBAP1-201ENST00000297661 ST6GALNAC6Q969X2 333 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms