RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 IGHV4-61A0A0C4DH41 118 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 IGHV2-70DA0A0C4DH43 119 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 ODF3BA8MYP8 253 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 H3BQ15 152 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 TPTE2P1Q5T6R2 138 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 YPEL4Q96NS1 127 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 SIRPDQ9H106 197 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 ZMAT5Q9UDW3 170 aaKnown RBP17.13■□□□□ 0.33
SOX17-201ENST00000297316 HOXB4P17483 251 aaPredicted RBP17.13■□□□□ 0.33
SOX17-201ENST00000297316 CD24P25063 80 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 MAS1LP35410 378 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 CDC34P49427 236 aaPredicted RBP17.13■□□□□ 0.33
SOX17-201ENST00000297316 WT1-ASQ06250 92 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 C2orf83Q53S99 150 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 FAM90A2PQ658T7 463 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 OR4A5Q8NH83 315 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 VSTM2AQ8TAG5 236 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 C10orf105Q8TEF2 133 aa17.13■□□□□ 0.33
SOX17-201ENST00000297316 UNKLQ9H9P5 680 aaKnown RBP17.13■□□□□ 0.33
SOX17-201ENST00000297316 ANKRD17O75179 2603 aaKnown RBP17.12■□□□□ 0.33
SOX17-201ENST00000297316 TIMM23O14925 209 aa17.12■□□□□ 0.33
SOX17-201ENST00000297316 FBLN7Q53RD9 439 aa17.12■□□□□ 0.33
SOX17-201ENST00000297316 DPM3Q9P2X0 92 aa17.12■□□□□ 0.33
SOX17-201ENST00000297316 PTPN13Q12923 2485 aa17.12■□□□□ 0.33
SOX17-201ENST00000297316 IGHV4-30-2A0A087WSY4 118 aa17.12■□□□□ 0.33
SOX17-201ENST00000297316 SEC14L6B5MCN3 397 aa17.12■□□□□ 0.33
SOX17-201ENST00000297316 DYNAPQ8N1N2 210 aa17.12■□□□□ 0.33
SOX17-201ENST00000297316 VAX2Q9UIW0 290 aa17.12■□□□□ 0.33
SOX17-201ENST00000297316 CYB5BO43169 146 aa17.11■□□□□ 0.33
SOX17-201ENST00000297316 VMA21Q3ZAQ7 101 aa17.11■□□□□ 0.33
SOX17-201ENST00000297316 TEPPQ6URK8 271 aa17.11■□□□□ 0.33
SOX17-201ENST00000297316 KIR3DL3Q8N743 410 aa17.11■□□□□ 0.33
SOX17-201ENST00000297316 PIMREGQ9BSJ6 248 aa17.11■□□□□ 0.33
SOX17-201ENST00000297316 IGKV1OR2-108A0A075B7D4 117 aa17.1■□□□□ 0.33
SOX17-201ENST00000297316 ZNF727A8MUV8 499 aa17.1■□□□□ 0.33
SOX17-201ENST00000297316 CD81P60033 236 aa17.1■□□□□ 0.33
SOX17-201ENST00000297316 C1orf122Q6ZSJ8 110 aa17.1■□□□□ 0.33
SOX17-201ENST00000297316 PMS2P11Q13670 270 aa17.1■□□□□ 0.33
SOX17-201ENST00000297316 SSX2Q16385 188 aa17.1■□□□□ 0.33
SOX17-201ENST00000297316 TBX15Q96SF7 602 aa17.1■□□□□ 0.33
SOX17-201ENST00000297316 ABCA12Q86UK0 2595 aa17.1■□□□□ 0.33
SOX17-201ENST00000297316 AP4M1O00189 453 aa17.09■□□□□ 0.33
SOX17-201ENST00000297316 TOX4O94842 621 aa17.09■□□□□ 0.33
SOX17-201ENST00000297316 CRYGBP07316 175 aa17.09■□□□□ 0.33
SOX17-201ENST00000297316 TAGLN2P37802 199 aaKnown RBP17.09■□□□□ 0.33
SOX17-201ENST00000297316 LGALS7P47929 136 aa17.09■□□□□ 0.33
SOX17-201ENST00000297316 STPG3Q8N7X2 389 aa17.09■□□□□ 0.33
SOX17-201ENST00000297316 GAMTQ14353 236 aa17.09■□□□□ 0.33
SOX17-201ENST00000297316 CLEC2AQ6UVW9 174 aa17.09■□□□□ 0.33
SOX17-201ENST00000297316 C1QL4Q86Z23 238 aa17.09■□□□□ 0.33
SOX17-201ENST00000297316 TCEAL7Q9BRU2 100 aa17.09■□□□□ 0.33
SOX17-201ENST00000297316 NIT2Q9NQR4 276 aa17.09■□□□□ 0.33
SOX17-201ENST00000297316 DOPEY2Q9Y3R5 2298 aa17.08■□□□□ 0.33
SOX17-201ENST00000297316 NBPF19A0A087WUL8 3843 aa17.08■□□□□ 0.33
SOX17-201ENST00000297316 VWC2LB2RUY7 222 aa17.08■□□□□ 0.33
SOX17-201ENST00000297316 INS-IGF2F8WCM5 200 aa17.08■□□□□ 0.33
SOX17-201ENST00000297316 IFNA1P01562 189 aa17.08■□□□□ 0.33
SOX17-201ENST00000297316 KRTAP10-9P60411 292 aa17.08■□□□□ 0.33
SOX17-201ENST00000297316 PSG5Q15238 335 aa17.08■□□□□ 0.33
SOX17-201ENST00000297316 REG1AP05451 166 aa17.08■□□□□ 0.32
SOX17-201ENST00000297316 RPS10P46783 165 aaKnown RBP17.08■□□□□ 0.32
SOX17-201ENST00000297316 CFHR4Q92496 578 aa17.08■□□□□ 0.32
SOX17-201ENST00000297316 CLN5O75503 358 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 VENTXO95231 258 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 ERHP84090 104 aaKnown RBP17.07■□□□□ 0.32
SOX17-201ENST00000297316 MEF2BQ02080 365 aaPredicted RBP17.07■□□□□ 0.32
SOX17-201ENST00000297316 SPATA31B1PQ5VZV4 182 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 FBXL15Q9H469 300 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 A0A1W2PN81 502 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 FNDC10F2Z333 226 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 FOXH1O75593 365 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 FABP1P07148 127 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 LINC00869P0C866 280 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 APELAP0DMC3 54 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 CHRNA7P36544 502 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 PRR20EP86478 221 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 PRR20CP86479 221 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 PRR20DP86480 221 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 PRR20BP86481 221 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 PRR20AP86496 221 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 CD69Q07108 199 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 PRSS8Q16651 343 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 TEX45Q8NA69 505 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 ABHD5Q8WTS1 349 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 P2RX4Q99571 388 aa17.07■□□□□ 0.32
SOX17-201ENST00000297316 ZNF343Q6P1L6 599 aa17.06■□□□□ 0.32
SOX17-201ENST00000297316 C19orf35Q6ZS72 473 aa17.06■□□□□ 0.32
SOX17-201ENST00000297316 TMEM144Q7Z5S9 345 aa17.06■□□□□ 0.32
SOX17-201ENST00000297316 SLC35E3Q7Z769 313 aa17.06■□□□□ 0.32
SOX17-201ENST00000297316 OR2T6Q8NHC8 308 aa17.06■□□□□ 0.32
SOX17-201ENST00000297316 NIPSNAP3BQ9BS92 247 aa17.06■□□□□ 0.32
SOX17-201ENST00000297316 GSN-AS1Q9NRJ2 163 aa17.06■□□□□ 0.32
SOX17-201ENST00000297316 SIGLEC9Q9Y336 463 aa17.06■□□□□ 0.32
SOX17-201ENST00000297316 A0A087WWC5 75 aa17.05■□□□□ 0.32
SOX17-201ENST00000297316 A0A1W2PPV4 95 aa17.05■□□□□ 0.32
SOX17-201ENST00000297316 PAGE4O60829 102 aa17.05■□□□□ 0.32
SOX17-201ENST00000297316 GATA2P23769 480 aaPredicted RBP17.05■□□□□ 0.32
SOX17-201ENST00000297316 CEACAM3P40198 252 aa17.05■□□□□ 0.32
SOX17-201ENST00000297316 RPL29P47914 159 aaKnown RBP17.05■□□□□ 0.32
SOX17-201ENST00000297316 TVP23CQ96ET8 276 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms