RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 KLRB1Q12918 225 aa7.57□□□□□ -1.2
PRDM9-201ENST00000296682 EFNB3Q15768 340 aa7.57□□□□□ -1.2
PRDM9-201ENST00000296682 KLF17Q5JT82 389 aaPredicted RBP7.57□□□□□ -1.2
PRDM9-201ENST00000296682 SLC25A48Q6ZT89 311 aaKnown RBP7.57□□□□□ -1.2
PRDM9-201ENST00000296682 METTL1Q9UBP6 276 aaKnown RBP7.57□□□□□ -1.2
PRDM9-201ENST00000296682 TRAV34A0A0B4J273 112 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 PMS2P5A8MQ11 134 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 B9A039 149 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 TRGC1P0CF51 173 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 IL3RAP26951 378 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 GATA4P43694 442 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 UBE2L3P68036 154 aaKnown RBP7.56□□□□□ -1.2
PRDM9-201ENST00000296682 NUP37Q8NFH4 326 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 SGMS2Q8NHU3 365 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 LINC00574Q9H8X3 128 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 PYYP10082 97 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 LOXP28300 417 aaPredicted RBP7.56□□□□□ -1.2
PRDM9-201ENST00000296682 VDAC2P45880 294 aaPredicted RBP7.56□□□□□ -1.2
PRDM9-201ENST00000296682 DIRC2Q96SL1 478 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 RAB1BQ9H0U4 201 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 WASHC3Q9Y3C0 194 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 ITGB1BP1O14713 200 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 IGHV3-23P01764 117 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 PPOXP50336 477 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 PRRX1P54821 245 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 LCN2P80188 198 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 TMEM170AQ8WVE7 144 aa7.56□□□□□ -1.2
PRDM9-201ENST00000296682 FAM90A9PA6NNJ1 464 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 H0YJW9 148 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 CXorf1O96002 111 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 IGHV1-8P0DP01 117 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 AREGP15514 252 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 GCHFRP30047 84 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 SUB1P53999 127 aaKnown RBP eCLIP7.55□□□□□ -1.2
PRDM9-201ENST00000296682 SSBP2P81877 361 aaPredicted RBP7.55□□□□□ -1.2
PRDM9-201ENST00000296682 GAMTQ14353 236 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 TMEM249Q2WGJ8 235 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 OR8B3Q8NGG8 313 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 LINC00479Q96M42 142 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 OR8B2Q96RD0 313 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 ZNF835Q9Y2P0 537 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 MYO9AB2RTY4 2548 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 UQCRFS1P47985 274 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 LYZP61626 148 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 C1QL4Q86Z23 238 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 LURAP1LQ8IV03 231 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 ZNF114Q8NC26 417 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 OR5AU1Q8NGC0 362 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 OR2T10Q8NGZ9 312 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 C22orf15Q8WYQ4 148 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 RAB1CQ92928 201 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 MANBALQ9NQG1 85 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 PNRC1Q12796 327 aaPredicted RBP7.55□□□□□ -1.2
PRDM9-201ENST00000296682 PQLC2Q6ZP29 291 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 FKBP11Q9NYL4 201 aa7.55□□□□□ -1.2
PRDM9-201ENST00000296682 RBFOX2O43251 390 aaKnown RBP eCLIP7.54□□□□□ -1.2
PRDM9-201ENST00000296682 RPL27AP46776 148 aaKnown RBP7.54□□□□□ -1.2
PRDM9-201ENST00000296682 ASCL2Q99929 193 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 SSBP3Q9BWW4 388 aaPredicted RBP7.54□□□□□ -1.2
PRDM9-201ENST00000296682 TMEM133Q9H2Q1 129 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 YTHDF2Q9Y5A9 579 aaKnown RBP7.54□□□□□ -1.2
PRDM9-201ENST00000296682 CSMD1Q96PZ7 3565 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 A0A087WWC5 75 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 TRBV23-1A0A0A0MS06 115 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 FCN1O00602 326 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 CGB3P0DN86 165 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 CGB7P0DN87 165 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 NPPCP23582 126 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 C9orf152Q5JTZ5 239 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 KCNIP4Q6PIL6 250 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 ZNF439Q8NDP4 499 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 EAF1Q96JC9 268 aaPredicted RBP7.54□□□□□ -1.2
PRDM9-201ENST00000296682 IMMP2LQ96T52 175 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 SLC25A33Q9BSK2 321 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 PRO1933Q9H354 126 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 GAR1Q9NY12 217 aaKnown RBP7.54□□□□□ -1.2
PRDM9-201ENST00000296682 TIMM9Q9Y5J7 89 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 ZNF462Q96JM2 2506 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 HELTA6NFD8 242 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 SOD3P08294 240 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 CA7P43166 264 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 PRCDQ00LT1 54 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 WT1-ASQ06250 92 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 MEF2CQ06413 473 aaPredicted RBP7.54□□□□□ -1.2
PRDM9-201ENST00000296682 KIAA1644Q3SXP7 199 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 OCC1Q8TAD7 63 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 FAM222BQ8WU58 562 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 CORO2AQ92828 525 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 TMEM186Q96B77 213 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 TPPP3Q9BW30 176 aa7.54□□□□□ -1.2
PRDM9-201ENST00000296682 IGHV2-26A0A0B4J1V2 119 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 XKRY2A2RUG3 117 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 SH2D7A6NKC9 451 aaPredicted RBP7.53□□□□□ -1.2
PRDM9-201ENST00000296682 HIST1H2BKO60814 126 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 CLN5O75503 358 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 CA1P00915 261 aaPredicted RBP7.53□□□□□ -1.2
PRDM9-201ENST00000296682 HIST1H2BJP06899 126 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 HIST1H2BOP23527 126 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 HIST1H2BBP33778 126 aa7.53□□□□□ -1.2
PRDM9-201ENST00000296682 GNG4P50150 75 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms