RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 LYPD6BQ8NI32 183 aa15.35■□□□□ 0.05
ITGB5-201ENST00000296181 SNRNP40Q96DI7 357 aaKnown RBP15.35■□□□□ 0.05
ITGB5-201ENST00000296181 AGMATQ9BSE5 352 aa15.35■□□□□ 0.05
ITGB5-201ENST00000296181 MUC21A0A0G2JKD1 596 aa15.35■□□□□ 0.05
ITGB5-201ENST00000296181 MUC21A0A140T8X8 626 aa15.35■□□□□ 0.05
ITGB5-201ENST00000296181 IGKV1D-33P01593 117 aa15.35■□□□□ 0.05
ITGB5-201ENST00000296181 IGKV1-33P01594 117 aa15.35■□□□□ 0.05
ITGB5-201ENST00000296181 MUC21Q5SSG8 566 aa15.35■□□□□ 0.05
ITGB5-201ENST00000296181 TRAV3A0A0B4J244 114 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 PCNX2A6NKB5 2137 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 MORN2Q502X0 79 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 TCF24Q7RTU0 167 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 LINC00473A8K010 186 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 J3QW42 95 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 PEX7O00628 323 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 FOXH1O75593 365 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 SELLP14151 372 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 NTF4P34130 210 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 GNG5P63218 68 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 SRSF7Q16629 238 aaKnown RBP eCLIP15.34■□□□□ 0.05
ITGB5-201ENST00000296181 TMEM208Q9BTX3 173 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 C19orf24Q9BVV8 132 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 METRNQ9UJH8 293 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 F11RQ9Y624 299 aaKnown RBP15.34■□□□□ 0.05
ITGB5-201ENST00000296181 TMEM144Q7Z5S9 345 aa15.34■□□□□ 0.05
ITGB5-201ENST00000296181 IQCF6A8MYZ5 107 aa15.33■□□□□ 0.04
ITGB5-201ENST00000296181 AP5S1Q9NUS5 200 aa15.33■□□□□ 0.04
ITGB5-201ENST00000296181 ZFP30Q9Y2G7 519 aa15.33■□□□□ 0.04
ITGB5-201ENST00000296181 LHFPL4Q7Z7J7 247 aa15.33■□□□□ 0.04
ITGB5-201ENST00000296181 HOXA4Q00056 320 aaPredicted RBP15.33■□□□□ 0.04
ITGB5-201ENST00000296181 FOXC1Q12948 553 aa15.33■□□□□ 0.04
ITGB5-201ENST00000296181 TMEM105Q8N8V8 129 aa15.33■□□□□ 0.04
ITGB5-201ENST00000296181 OR4C13Q8NGP0 309 aa15.33■□□□□ 0.04
ITGB5-201ENST00000296181 CKS2P33552 79 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 FOXL2NBQ6ZUU3 175 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 THYN1Q9P016 225 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 GCSHP23434 173 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 UNQ5815/PRO19632Q6UWF5 114 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 YLPM1P49750 1951 aaKnown RBP15.32■□□□□ 0.04
ITGB5-201ENST00000296181 SAA2-SAA4A0A096LPE2 208 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 TRAV5A0A0B4J249 113 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 IGHV3-35A0A0C4DH35 117 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 IGKV1-39P01597 117 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 IGKV1D-39P04432 117 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 SAA2P0DJI9 122 aaPredicted RBP15.32■□□□□ 0.04
ITGB5-201ENST00000296181 WDR31Q8NA23 367 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 SCNM1Q9BWG6 230 aa15.32■□□□□ 0.04
ITGB5-201ENST00000296181 MYOD1P15172 320 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 FCGR2BP31994 310 aaPredicted RBP15.31■□□□□ 0.04
ITGB5-201ENST00000296181 TWIST1Q15672 202 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 MRPL32Q9BYC8 188 aaKnown RBP15.31■□□□□ 0.04
ITGB5-201ENST00000296181 HILPDAQ9Y5L2 63 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 TRAV9-1A0A075B6T8 112 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 IZUMO1RA6ND01 250 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 B3GALT5-AS1P59052 145 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 MGST2Q99735 147 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 TMUB1Q9BVT8 246 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 CRIM1Q9NZV1 1036 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 POLR3KQ9Y2Y1 108 aaPredicted RBP15.31■□□□□ 0.04
ITGB5-201ENST00000296181 TICRRQ7Z2Z1 1910 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 IGKV3-7A0A075B6H7 116 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 SCGB1C2P0DMR2 95 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 Q6P435 159 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 C16orf97H3BN30 126 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 GRAMD2BQ96HH9 432 aa15.31■□□□□ 0.04
ITGB5-201ENST00000296181 GTF3C1Q12789 2109 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 IGKV3D-15A0A087WSY6 115 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 TMEM189A5PLL7 270 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 C15orf62A8K5M9 175 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 CD40P25942 277 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 GFRA1P56159 465 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 Q0VFX4 171 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 Q6ZS49 121 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 ALKBH7Q9BT30 221 aaPredicted RBP15.3■□□□□ 0.04
ITGB5-201ENST00000296181 OSTCQ9NRP0 149 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 CHD3Q12873 2000 aaKnown RBP15.3■□□□□ 0.04
ITGB5-201ENST00000296181 FAM90A27PA6NNH2 459 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 ETV2O00321 342 aaPredicted RBP15.3■□□□□ 0.04
ITGB5-201ENST00000296181 FDCSPQ8NFU4 85 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 KBTBD11-OT1A0A1B0GTJ5 212 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 C15orf61A6NNL5 157 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 UNQ6494/PRO21346Q6UXR6 183 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 OR10W1Q8NGF6 305 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 S4R3C0 116 aa15.3■□□□□ 0.04
ITGB5-201ENST00000296181 IGHV2OR16-5A0A0B4J2B6 119 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 IL18BPO95998 194 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 LIPFP07098 398 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 PRB3Q04118 309 aaPredicted RBP15.29■□□□□ 0.04
ITGB5-201ENST00000296181 OR10AG1Q8NH19 301 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 GNB1LQ9BYB4 327 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 MC5RP33032 325 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 ARF6P62330 175 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 ZCCHC24Q8N2G6 241 aaKnown RBP15.29■□□□□ 0.04
ITGB5-201ENST00000296181 CDC42EP3Q9UKI2 254 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 MRPS18CQ9Y3D5 142 aaKnown RBP15.29■□□□□ 0.04
ITGB5-201ENST00000296181 SP9P0CG40 484 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 TDGF1P3P51864 188 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 PLP1P60201 277 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 TM4SF20Q53R12 229 aa15.29■□□□□ 0.04
ITGB5-201ENST00000296181 HAPLN4Q86UW8 402 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms