RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 H2BFSP57053 126 aa17.48■□□□□ 0.39
LINC01116-201ENST00000295549 C11orf87Q6NUJ2 197 aa17.48■□□□□ 0.39
LINC01116-201ENST00000295549 C8orf86Q6ZUL3 223 aa17.48■□□□□ 0.39
LINC01116-201ENST00000295549 OR4F17Q8NGA8 305 aa17.48■□□□□ 0.39
LINC01116-201ENST00000295549 VN1R17PQ8TDU5 208 aa17.48■□□□□ 0.39
LINC01116-201ENST00000295549 OR5B12Q96R08 314 aa17.48■□□□□ 0.39
LINC01116-201ENST00000295549 OR4F4Q96R69 305 aa17.48■□□□□ 0.39
LINC01116-201ENST00000295549 MED28Q9H204 178 aa17.48■□□□□ 0.39
LINC01116-201ENST00000295549 MGAT4CQ9UBM8 478 aa17.48■□□□□ 0.39
LINC01116-201ENST00000295549 CORTO00230 105 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 SCGB1D2O95969 90 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 IFNA10P01566 189 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 NPY1RP25929 384 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 FAM209BQ5JX69 171 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 TMEM170AQ8WVE7 144 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 RAB40CQ96S21 281 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 RCL1Q9Y2P8 373 aaKnown RBP17.47■□□□□ 0.39
LINC01116-201ENST00000295549 I3L2K1 104 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 K7EIM0 57 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 EXOSC2Q13868 293 aaKnown RBP17.47■□□□□ 0.39
LINC01116-201ENST00000295549 EEF1AKMT3Q96AZ1 226 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 MISP3Q96FF7 219 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 SMIM8Q96KF7 97 aa17.47■□□□□ 0.39
LINC01116-201ENST00000295549 TRBV7-1A0A0A6YYK4 115 aa17.46■□□□□ 0.39
LINC01116-201ENST00000295549 MFSD2BA6NFX1 497 aa17.46■□□□□ 0.39
LINC01116-201ENST00000295549 SSSCA1O60232 199 aa17.46■□□□□ 0.39
LINC01116-201ENST00000295549 RPP30P78346 268 aaKnown RBP17.46■□□□□ 0.39
LINC01116-201ENST00000295549 RNASEH2CQ8TDP1 164 aaKnown RBP17.46■□□□□ 0.39
LINC01116-201ENST00000295549 RAX2Q96IS3 184 aa17.46■□□□□ 0.39
LINC01116-201ENST00000295549 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.45■□□□□ 0.38
LINC01116-201ENST00000295549 K7EPK0 472 aa17.45■□□□□ 0.38
LINC01116-201ENST00000295549 MT-CO2P00403 227 aa17.45■□□□□ 0.38
LINC01116-201ENST00000295549 CXCL3P19876 107 aa17.45■□□□□ 0.38
LINC01116-201ENST00000295549 TAS2R30P59541 319 aa17.45■□□□□ 0.38
LINC01116-201ENST00000295549 FCN2Q15485 313 aa17.45■□□□□ 0.38
LINC01116-201ENST00000295549 OR11H1Q8NG94 326 aa17.45■□□□□ 0.38
LINC01116-201ENST00000295549 ZNF502Q8TBZ5 544 aa17.45■□□□□ 0.38
LINC01116-201ENST00000295549 SCARB1Q8WTV0 552 aa17.45■□□□□ 0.38
LINC01116-201ENST00000295549 ATP6V0BQ99437 205 aa17.45■□□□□ 0.38
LINC01116-201ENST00000295549 CCL24O00175 119 aa17.44■□□□□ 0.38
LINC01116-201ENST00000295549 TMEM50AO95807 157 aa17.44■□□□□ 0.38
LINC01116-201ENST00000295549 HSPB1P04792 205 aaKnown RBP17.44■□□□□ 0.38
LINC01116-201ENST00000295549 PAX9P55771 341 aa17.44■□□□□ 0.38
LINC01116-201ENST00000295549 RRAS2P62070 204 aaPredicted RBP17.44■□□□□ 0.38
LINC01116-201ENST00000295549 RAB32Q13637 225 aa17.44■□□□□ 0.38
LINC01116-201ENST00000295549 DEFB136Q30KP8 78 aa17.44■□□□□ 0.38
LINC01116-201ENST00000295549 PINX1Q96BK5 328 aaKnown RBP17.44■□□□□ 0.38
LINC01116-201ENST00000295549 CCDC140Q96MF4 163 aa17.44■□□□□ 0.38
LINC01116-201ENST00000295549 RANGRFQ9HD47 186 aaPredicted RBP17.44■□□□□ 0.38
LINC01116-201ENST00000295549 PEF1Q9UBV8 284 aaKnown RBP17.44■□□□□ 0.38
LINC01116-201ENST00000295549 C15orf62A8K5M9 175 aa17.43■□□□□ 0.38
LINC01116-201ENST00000295549 MYCNOSP40205 109 aa17.43■□□□□ 0.38
LINC01116-201ENST00000295549 FHL3Q13643 280 aa17.43■□□□□ 0.38
LINC01116-201ENST00000295549 ETV3LQ6ZN32 361 aa17.43■□□□□ 0.38
LINC01116-201ENST00000295549 OR11H7Q8NGC8 314 aa17.43■□□□□ 0.38
LINC01116-201ENST00000295549 OR1N2Q8NGR9 330 aa17.43■□□□□ 0.38
LINC01116-201ENST00000295549 C21orf62Q9NYP8 219 aa17.43■□□□□ 0.38
LINC01116-201ENST00000295549 PSENENQ9NZ42 101 aa17.43■□□□□ 0.38
LINC01116-201ENST00000295549 STRAPQ9Y3F4 350 aaKnown RBP17.43■□□□□ 0.38
LINC01116-201ENST00000295549 LSM5Q9Y4Y9 91 aaKnown RBP17.43■□□□□ 0.38
LINC01116-201ENST00000295549 IGHV3-21A0A0B4J1V1 117 aa17.42■□□□□ 0.38
LINC01116-201ENST00000295549 TSPAN15O95858 294 aa17.42■□□□□ 0.38
LINC01116-201ENST00000295549 FCGR2BP31994 310 aaPredicted RBP17.42■□□□□ 0.38
LINC01116-201ENST00000295549 S100A10P60903 97 aa17.42■□□□□ 0.38
LINC01116-201ENST00000295549 RAB11AP62491 216 aa17.42■□□□□ 0.38
LINC01116-201ENST00000295549 ZNF616Q08AN1 781 aa17.42■□□□□ 0.38
LINC01116-201ENST00000295549 SPANXN5Q5MJ07 72 aa17.42■□□□□ 0.38
LINC01116-201ENST00000295549 OR4C12Q96R67 309 aa17.42■□□□□ 0.38
LINC01116-201ENST00000295549 C11orf1Q9H5F2 150 aa17.42■□□□□ 0.38
LINC01116-201ENST00000295549 FNDC4Q9H6D8 234 aaPredicted RBP17.42■□□□□ 0.38
LINC01116-201ENST00000295549 S4R3C0 116 aa17.42■□□□□ 0.38
LINC01116-201ENST00000295549 VWFP04275 2813 aa17.42■□□□□ 0.38
LINC01116-201ENST00000295549 WNK1Q9H4A3 2382 aa17.41■□□□□ 0.38
LINC01116-201ENST00000295549 ANKRD34BA5PLL1 514 aa17.41■□□□□ 0.38
LINC01116-201ENST00000295549 LINC01619G3V211 115 aa17.41■□□□□ 0.38
LINC01116-201ENST00000295549 TSC22D2O75157 780 aa17.41■□□□□ 0.38
LINC01116-201ENST00000295549 TRBV12-3P01733 135 aa17.41■□□□□ 0.38
LINC01116-201ENST00000295549 IGHV3-23P01764 117 aa17.41■□□□□ 0.38
LINC01116-201ENST00000295549 IFNA4P05014 189 aa17.41■□□□□ 0.38
LINC01116-201ENST00000295549 CLEC3BP05452 202 aa17.41■□□□□ 0.38
LINC01116-201ENST00000295549 OPRK1P41145 380 aa17.41■□□□□ 0.38
LINC01116-201ENST00000295549 TXN2Q99757 166 aa17.41■□□□□ 0.38
LINC01116-201ENST00000295549 RPS10-NUDT3A0A1W2PQS6 291 aa17.4■□□□□ 0.38
LINC01116-201ENST00000295549 PF4P02776 101 aa17.4■□□□□ 0.38
LINC01116-201ENST00000295549 PVALBP20472 110 aaPredicted RBP17.4■□□□□ 0.38
LINC01116-201ENST00000295549 MFAP4P55083 255 aa17.4■□□□□ 0.38
LINC01116-201ENST00000295549 CLEC19AQ6UXS0 136 aa17.4■□□□□ 0.38
LINC01116-201ENST00000295549 Q6ZNX1 250 aa17.4■□□□□ 0.38
LINC01116-201ENST00000295549 PPP1R1CQ8WVI7 109 aa17.4■□□□□ 0.38
LINC01116-201ENST00000295549 ASB13Q8WXK3 278 aa17.4■□□□□ 0.38
LINC01116-201ENST00000295549 DPF1Q92782 380 aa17.4■□□□□ 0.38
LINC01116-201ENST00000295549 WDR89Q96FK6 387 aaPredicted RBP17.4■□□□□ 0.38
LINC01116-201ENST00000295549 DUX3Q96PT4 197 aa17.4■□□□□ 0.38
LINC01116-201ENST00000295549 IGHV4OR15-8A0A075B7B6 117 aa17.39■□□□□ 0.38
LINC01116-201ENST00000295549 A0A087WW49 117 aa17.39■□□□□ 0.38
LINC01116-201ENST00000295549 F8W735 103 aaPredicted RBP17.39■□□□□ 0.38
LINC01116-201ENST00000295549 H3BP45 60 aa17.39■□□□□ 0.38
LINC01116-201ENST00000295549 L7N2F9 121 aa17.39■□□□□ 0.38
LINC01116-201ENST00000295549 DEDDO75618 318 aa17.39■□□□□ 0.38
LINC01116-201ENST00000295549 RLN2P04090 185 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms