RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 GNG5P63218 68 aa12.67□□□□□ -0.38
CAPN2-201ENST00000295006 Q56UQ5 140 aa12.67□□□□□ -0.38
CAPN2-201ENST00000295006 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
CAPN2-201ENST00000295006 ZCCHC14Q8WYQ9 949 aaKnown RBP12.67□□□□□ -0.38
CAPN2-201ENST00000295006 ATRXP46100 2492 aa12.67□□□□□ -0.38
CAPN2-201ENST00000295006 GLRXP35754 106 aa12.66□□□□□ -0.38
CAPN2-201ENST00000295006 SPG11Q96JI7 2443 aa12.66□□□□□ -0.38
CAPN2-201ENST00000295006 NDUFB3O43676 98 aa12.66□□□□□ -0.38
CAPN2-201ENST00000295006 CNIH1O95406 144 aa12.66□□□□□ -0.38
CAPN2-201ENST00000295006 FOXA3P55318 350 aaPredicted RBP12.66□□□□□ -0.38
CAPN2-201ENST00000295006 RPL8P62917 257 aaKnown RBP12.66□□□□□ -0.38
CAPN2-201ENST00000295006 C10orf113Q5VZT2 155 aa12.66□□□□□ -0.38
CAPN2-201ENST00000295006 ST6GALNAC3Q8NDV1 305 aa12.66□□□□□ -0.38
CAPN2-201ENST00000295006 TMEM106BQ9NUM4 274 aa12.66□□□□□ -0.38
CAPN2-201ENST00000295006 TBL2Q9Y4P3 447 aaKnown RBP12.66□□□□□ -0.38
CAPN2-201ENST00000295006 VDAC2P45880 294 aaPredicted RBP12.66□□□□□ -0.38
CAPN2-201ENST00000295006 ZNF474Q6S9Z5 364 aaPredicted RBP12.66□□□□□ -0.38
CAPN2-201ENST00000295006 Q6ZN92 141 aa12.66□□□□□ -0.38
CAPN2-201ENST00000295006 C1orf229Q6ZS94 237 aaPredicted RBP12.66□□□□□ -0.38
CAPN2-201ENST00000295006 PRR7Q8TB68 274 aa12.66□□□□□ -0.38
CAPN2-201ENST00000295006 ADTRPQ96IZ2 230 aa12.66□□□□□ -0.38
CAPN2-201ENST00000295006 PAXXQ9BUH6 204 aa12.66□□□□□ -0.38
CAPN2-201ENST00000295006 TNFRSF1AP19438 455 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 BRS3P32247 399 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 KIR3DL3Q8N743 410 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 RALYQ9UKM9 306 aaKnown RBP12.65□□□□□ -0.38
CAPN2-201ENST00000295006 AMMECR1Q9Y4X0 333 aaPredicted RBP12.65□□□□□ -0.38
CAPN2-201ENST00000295006 PRRG2O14669 202 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 C8orf88P0DMB2 117 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 TMEM108Q6UXF1 575 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 OR1L8Q8NGR8 309 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 PARD6GQ9BYG4 376 aaPredicted RBP12.65□□□□□ -0.38
CAPN2-201ENST00000295006 POLR3KQ9Y2Y1 108 aaPredicted RBP12.65□□□□□ -0.38
CAPN2-201ENST00000295006 PPIAL4AQ9Y536 164 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 SLC25A15Q9Y619 301 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 APCSP02743 223 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 RBP4P02753 201 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 SUB1P53999 127 aaKnown RBP eCLIP12.65□□□□□ -0.381e-13■■■■■ 63.7
CAPN2-201ENST00000295006 TCTAP57738 103 aa12.65□□□□□ -0.38
CAPN2-201ENST00000295006 SRRM4A7MD48 611 aaKnown RBP12.64□□□□□ -0.39
CAPN2-201ENST00000295006 K7EN84 100 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 SNHG12Q9BXW3 62 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 GNB4Q9HAV0 340 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 DNAJC4Q9NNZ3 241 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 S4R3C0 116 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 PGPA6NDG6 321 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 C19orf67A6NJJ6 358 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 C19orf35Q6ZS72 473 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 TEX50A0A1B0GTY4 177 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 IGHV1-46P01743 117 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 HNRNPA3P51991 378 aaKnown RBP12.64□□□□□ -0.39
CAPN2-201ENST00000295006 LYZP61626 148 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 FOXL1Q12952 345 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 HES1Q14469 280 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 CENPVQ7Z7K6 275 aaPredicted RBP12.64□□□□□ -0.39
CAPN2-201ENST00000295006 GAL3ST2Q9H3Q3 398 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 PLSCR4Q9NRQ2 329 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 ARL2-SNX15V9GYD0 113 aa12.64□□□□□ -0.39
CAPN2-201ENST00000295006 DYSFO75923 2080 aa12.63□□□□□ -0.39
CAPN2-201ENST00000295006 TNFSF13O75888 250 aa12.63□□□□□ -0.39
CAPN2-201ENST00000295006 LOXL3P58215 753 aa12.63□□□□□ -0.39
CAPN2-201ENST00000295006 ZNF714Q96N38 554 aa12.63□□□□□ -0.39
CAPN2-201ENST00000295006 PYGO2Q9BRQ0 406 aa12.63□□□□□ -0.39
CAPN2-201ENST00000295006 GSX1Q9H4S2 264 aaPredicted RBP12.63□□□□□ -0.39
CAPN2-201ENST00000295006 M0R2Z0 102 aa12.63□□□□□ -0.39
CAPN2-201ENST00000295006 BPIFB3P59826 476 aa12.63□□□□□ -0.39
CAPN2-201ENST00000295006 LRRC10Q5BKY1 277 aa12.63□□□□□ -0.39
CAPN2-201ENST00000295006 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.63□□□□□ -0.394e-7■■■■□ 26.1
CAPN2-201ENST00000295006 DIAPH2-AS1Q14236 149 aa12.63□□□□□ -0.39
CAPN2-201ENST00000295006 ASCL2Q99929 193 aa12.63□□□□□ -0.39
CAPN2-201ENST00000295006 LYNX1G3V0Z9 82 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 UPK2O00526 184 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 LYNX1P0DP58 116 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 SPATA45Q537H7 98 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 TIMM23BQ5SRD1 257 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 LCN12Q6JVE5 192 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 PDPNQ86YL7 162 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 C17orf58Q2M2W7 97 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 Q6ZWC4 215 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 ERASQ7Z444 233 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 TMEM144Q7Z5S9 345 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 TXNDC17Q9BRA2 123 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 MUC6Q6W4X9 2439 aa12.62□□□□□ -0.39
CAPN2-201ENST00000295006 CT45A6P0DMU7 189 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 CT45A5P0DMU8 189 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 CT45A7P0DMV0 189 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 CD24P25063 80 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 CD40P25942 277 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 PAFAH1B2P68402 229 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 MBNL2Q5VZF2 373 aaKnown RBP12.61□□□□□ -0.39
CAPN2-201ENST00000295006 GFRALQ6UXV0 394 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 C1orf162Q8NEQ5 155 aaPredicted RBP12.61□□□□□ -0.39
CAPN2-201ENST00000295006 DSCAMO60469 2012 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 PPIAL4EA0A075B759 164 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 PPIAL4DF5H284 164 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 P0C879 139 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 PPIAL4FP0DN26 164 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 RAB4AP20338 218 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 ST6GALNAC6Q969X2 333 aa12.61□□□□□ -0.39
CAPN2-201ENST00000295006 NRN1Q9NPD7 142 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms