RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 CORO2AQ92828 525 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 DEFB127Q9H1M4 99 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 PRRC2CQ9Y520 2896 aaKnown RBP8.43□□□□□ -1.06
LMX1A-201ENST00000294816 TNRC6BQ9UPQ9 1833 aaKnown RBP8.43□□□□□ -1.06
LMX1A-201ENST00000294816 CEP192Q8TEP8 1941 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 HIGD1CA8MV81 97 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 APOA2P02652 100 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 ADH4P08319 380 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 RIPPLY3P57055 190 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 LRRC10Q5BKY1 277 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 LRRC29Q8WV35 223 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 SNRNP40Q96DI7 357 aaKnown RBP8.43□□□□□ -1.06
LMX1A-201ENST00000294816 ZNF503Q96F45 646 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 OR2V2Q96R30 315 aa8.43□□□□□ -1.06
LMX1A-201ENST00000294816 IGHV3OR15-7A0A075B7D8 119 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 TAX1BP3O14907 124 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 AGFG2O95081 481 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 IGHV3-48P01763 117 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 PYYP10082 97 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 TMPRSS3P57727 454 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 HSPE1P61604 102 aaKnown RBP8.42□□□□□ -1.06
LMX1A-201ENST00000294816 PRR20EP86478 221 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 PRR20CP86479 221 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 PRR20DP86480 221 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 PRR20BP86481 221 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 PRR20AP86496 221 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 SSPNQ14714 243 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 TBR1Q16650 682 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 SMIM21Q3B7S5 101 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 TCF24Q7RTU0 167 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 TMEM251Q8N6I4 163 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 OR4S2Q8NH73 311 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 KLF14Q8TD94 323 aaPredicted RBP8.42□□□□□ -1.06
LMX1A-201ENST00000294816 TTTY12Q9BZ98 90 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 GSX1Q9H4S2 264 aaPredicted RBP8.42□□□□□ -1.06
LMX1A-201ENST00000294816 SLC25A10Q9UBX3 287 aaPredicted RBP8.42□□□□□ -1.06
LMX1A-201ENST00000294816 ICE1Q9Y2F5 2266 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 A0A087X0K7 114 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 C2orf70A6NJV1 201 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 PLAUP00749 431 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 GABRA6Q16445 453 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 ZNF766Q5HY98 468 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 NUDT10Q8NFP7 164 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 NUDT11Q96G61 164 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 AMMECR1Q9Y4X0 333 aaPredicted RBP8.42□□□□□ -1.06
LMX1A-201ENST00000294816 OR51B2Q9Y5P1 312 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 C15orf61A6NNL5 157 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 CSN3P07498 182 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 C8orf88P0DMB2 117 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 TCTAP57738 103 aa8.42□□□□□ -1.06
LMX1A-201ENST00000294816 J3QR06 171 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 LEPROTL1O95214 131 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 SP1P08047 785 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 UQCRFS1P47985 274 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 CXCL12P48061 93 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 ZNF134P52741 427 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 GNG5P63218 68 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 UTF1Q5T230 341 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 BVES-AS1Q5T3Y7 98 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 MORN5Q5VZ52 161 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 WDR82Q6UXN9 313 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 PRDX2P32119 198 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 ZNF138P52744 262 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 PSG9Q00887 426 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 CD177Q8N6Q3 437 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 CT55Q8WUE5 264 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 IGF2BP2-AS1Q96M15 143 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 ZPBPQ9BS86 351 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 COMMD5Q9GZQ3 224 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 LHFPL4Q7Z7J7 247 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 BLNKQ8WV28 456 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 GRAMD2BQ96HH9 432 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 TMEM191AQ9H0A3 160 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 MEGF9Q9H1U4 602 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 CXXC4Q9H2H0 198 aa8.41□□□□□ -1.06
LMX1A-201ENST00000294816 IGKV1OR2-108A0A075B7D4 117 aa8.4□□□□□ -1.06
LMX1A-201ENST00000294816 C15orf65H3BRN8 121 aa8.4□□□□□ -1.06
LMX1A-201ENST00000294816 K7ERU9 68 aa8.4□□□□□ -1.06
LMX1A-201ENST00000294816 PPBPP02775 128 aa8.4□□□□□ -1.06
LMX1A-201ENST00000294816 C11orf53Q8IXP5 236 aa8.4□□□□□ -1.06
LMX1A-201ENST00000294816 SPEM1Q8N4L4 309 aa8.4□□□□□ -1.06
LMX1A-201ENST00000294816 ZNRF1Q8ND25 227 aa8.4□□□□□ -1.06
LMX1A-201ENST00000294816 GAGE12BA1L429 117 aa8.4□□□□□ -1.07
LMX1A-201ENST00000294816 IQCF6A8MYZ5 107 aa8.4□□□□□ -1.07
LMX1A-201ENST00000294816 C12orf54Q6X4T0 127 aa8.4□□□□□ -1.07
LMX1A-201ENST00000294816 PGLYRP4Q96LB8 373 aa8.4□□□□□ -1.07
LMX1A-201ENST00000294816 AP1S3Q96PC3 154 aa8.4□□□□□ -1.07
LMX1A-201ENST00000294816 NAA38Q9BRA0 125 aaKnown RBP8.4□□□□□ -1.07
LMX1A-201ENST00000294816 ST20Q9HBF5 79 aa8.4□□□□□ -1.07
LMX1A-201ENST00000294816 ABI3Q9P2A4 366 aa8.4□□□□□ -1.07
LMX1A-201ENST00000294816 TRGV8A0A0C4DH27 118 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 A0A1W2PRE2 83 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 SYS1-DBNDD2H3BUS1 97 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 COX7A2P2O60397 106 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 ARFGEF3Q5TH69 2177 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 FAM90A9PA6NNJ1 464 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 PATE3B3GLJ2 98 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 TNFSF15O95150 251 aa8.39□□□□□ -1.07
LMX1A-201ENST00000294816 C1orf229Q6ZS94 237 aaPredicted RBP8.39□□□□□ -1.07
LMX1A-201ENST00000294816 SLC25A33Q9BSK2 321 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms