RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 TDRD15B5MCY1 1934 aaKnown RBP13.56□□□□□ -0.24
SSRP1-202ENST00000293880 PRR19A6NJB7 356 aa13.56□□□□□ -0.24
SSRP1-202ENST00000293880 RPL23P62829 140 aaKnown RBP13.56□□□□□ -0.24
SSRP1-202ENST00000293880 SDF2L1Q9HCN8 221 aa13.56□□□□□ -0.24
SSRP1-202ENST00000293880 KBTBD11-OT1A0A1B0GTJ5 212 aa13.56□□□□□ -0.24
SSRP1-202ENST00000293880 COL4A1P02462 1669 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 PYYP10082 97 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 ESDP10768 282 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 LRTM2Q8N967 370 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 VSIRQ9H7M9 311 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 CRIM1Q9NZV1 1036 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 SPINK8P0C7L1 97 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 S100A7L2Q5SY68 101 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 CFAP161Q6P656 301 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 ARPC1AQ92747 370 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 A0A1B0GUT8 65 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 GZMBP10144 247 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 FAM89BQ8N5H3 189 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 PHLDA1Q8WV24 401 aaPredicted RBP13.55□□□□□ -0.24
SSRP1-202ENST00000293880 ATAD5Q96QE3 1844 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 TMEM250H0YL14 139 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 DLEU1O43261 78 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 HBDP02042 147 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 SP9P0CG40 484 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 RTN4RL2Q86UN3 420 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 C1orf174Q8IYL3 243 aa13.55□□□□□ -0.24
SSRP1-202ENST00000293880 RNF222A6NCQ9 220 aa13.54□□□□□ -0.24
SSRP1-202ENST00000293880 H3BRM9 83 aa13.54□□□□□ -0.24
SSRP1-202ENST00000293880 ZNF837Q96EG3 531 aaPredicted RBP13.54□□□□□ -0.24
SSRP1-202ENST00000293880 C18orf12Q96KH6 178 aa13.54□□□□□ -0.24
SSRP1-202ENST00000293880 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.54□□□□□ -0.24
SSRP1-202ENST00000293880 VENTXO95231 258 aa13.54□□□□□ -0.24
SSRP1-202ENST00000293880 CD7P09564 240 aa13.54□□□□□ -0.24
SSRP1-202ENST00000293880 NUTF2P61970 127 aaKnown RBP13.54□□□□□ -0.24
SSRP1-202ENST00000293880 C19orf24Q9BVV8 132 aa13.54□□□□□ -0.24
SSRP1-202ENST00000293880 IGHV3-73A0A0B4J1V6 119 aa13.54□□□□□ -0.24
SSRP1-202ENST00000293880 FGF11Q92914 225 aa13.54□□□□□ -0.24
SSRP1-202ENST00000293880 WFDC1Q9HC57 220 aa13.54□□□□□ -0.24
SSRP1-202ENST00000293880 BSPH1Q075Z2 132 aa13.53□□□□□ -0.24
SSRP1-202ENST00000293880 SLC25A2Q9BXI2 301 aa13.53□□□□□ -0.24
SSRP1-202ENST00000293880 LOXL4Q96JB6 756 aa13.53□□□□□ -0.24
SSRP1-202ENST00000293880 TRGV2A0A075B6R0 118 aa13.53□□□□□ -0.24
SSRP1-202ENST00000293880 GPX4P36969 197 aaPredicted RBP13.53□□□□□ -0.24
SSRP1-202ENST00000293880 COQ2Q96H96 371 aa13.53□□□□□ -0.24
SSRP1-202ENST00000293880 SSBP2P81877 361 aaPredicted RBP13.53□□□□□ -0.24
SSRP1-202ENST00000293880 PLPPR1Q8TBJ4 325 aa13.53□□□□□ -0.24
SSRP1-202ENST00000293880 SRSF8Q9BRL6 282 aaKnown RBP13.53□□□□□ -0.24
SSRP1-202ENST00000293880 CD33P20138 364 aa13.52□□□□□ -0.24
SSRP1-202ENST00000293880 CHTOPQ9Y3Y2 248 aaKnown RBP13.52□□□□□ -0.24
SSRP1-202ENST00000293880 COL5A3P25940 1745 aaPredicted RBP13.52□□□□□ -0.24
SSRP1-202ENST00000293880 SAA2-SAA4A0A096LPE2 208 aa13.52□□□□□ -0.24
SSRP1-202ENST00000293880 ATP5LO75964 103 aa13.52□□□□□ -0.24
SSRP1-202ENST00000293880 SAA2P0DJI9 122 aaPredicted RBP13.52□□□□□ -0.24
SSRP1-202ENST00000293880 TMEM42Q69YG0 159 aa13.52□□□□□ -0.24
SSRP1-202ENST00000293880 ZNF525Q8N782 197 aa13.52□□□□□ -0.24
SSRP1-202ENST00000293880 FOXL1Q12952 345 aa13.52□□□□□ -0.25
SSRP1-202ENST00000293880 EIF4EBP2Q13542 120 aaPredicted RBP13.52□□□□□ -0.25
SSRP1-202ENST00000293880 GATD1Q8NB37 220 aa13.52□□□□□ -0.25
SSRP1-202ENST00000293880 A0A087X0K7 114 aa13.52□□□□□ -0.25
SSRP1-202ENST00000293880 ORMDL3Q8N138 153 aa13.52□□□□□ -0.25
SSRP1-202ENST00000293880 SAP25Q8TEE9 199 aa13.52□□□□□ -0.25
SSRP1-202ENST00000293880 FDCSPQ8NFU4 85 aa13.52□□□□□ -0.25
SSRP1-202ENST00000293880 ZXDCQ2QGD7 858 aaPredicted RBP13.51□□□□□ -0.25
SSRP1-202ENST00000293880 CEP290O15078 2479 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 TRAV9-2A0A087WT02 112 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 A0A0G2JK05 382 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 PILRBQ9UKJ0 227 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 PIKFYVEQ9Y2I7 2098 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 A8MXK9 166 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 HIST1H2BKO60814 126 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 HIST1H2BJP06899 126 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 HIST1H2BOP23527 126 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 HIST1H2BBP33778 126 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 HIST1H2BDP58876 126 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 HIST1H2BCP62807 126 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 HIST2H2BEQ16778 126 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.51□□□□□ -0.25
SSRP1-202ENST00000293880 DNM1P46Q6ZS02 220 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 HIST1H2BHQ93079 126 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 HIST1H2BNQ99877 126 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 HIST1H2BMQ99879 126 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 SFXN3Q9BWM7 321 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 TRIOBPQ9H2D6 2365 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 A0A0G2JLM5 398 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 CECR9P0C854 216 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 GTSCR1Q86UQ5 136 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 ASCL2Q99929 193 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 SCRT1Q9BWW7 348 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 CCL3L1P16619 93 aa13.51□□□□□ -0.25
SSRP1-202ENST00000293880 NDUFA2O43678 99 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 IGKV1D-13A0A0B4J2D9 117 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 SLC25A20O43772 301 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 IGKV1-13P0DP09 117 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 CCL20P78556 96 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 TNS1Q9HBL0 1735 aaKnown RBP13.5□□□□□ -0.25
SSRP1-202ENST00000293880 FOXH1O75593 365 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 SMIM10L1P0DMW3 83 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 NR2C2APQ86WQ0 139 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 SMIM10Q96HG1 83 aa13.5□□□□□ -0.25
SSRP1-202ENST00000293880 CDKN1AP38936 164 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms