RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 UBE2E1P51965 193 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 FAM74A4Q5TZK3 123 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 BTNL8Q6UX41 500 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 FAM110DQ8TAY7 271 aaPredicted RBP6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 GALNT14Q96FL9 552 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 DPM3Q9P2X0 92 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 SCGB1D1O95968 90 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 IGLV1-47P01700 117 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 ID1P41134 155 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 Q1RN00 199 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 ZNF329Q86UD4 541 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 TBC1D26Q86UD7 250 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 ODF3L1Q8IXM7 274 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 SGK494Q96LW2 274 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 IGKV1D-13A0A0B4J2D9 117 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 DUXBA0A1W2PPF3 345 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 H0Y980 276 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 EIF3GO75821 320 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 IGKV1-13P0DP09 117 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 FCGR2BP31994 310 aaPredicted RBP6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 GALR1P47211 349 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 FGF8P55075 233 aaPredicted RBP6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 HLA-DRB5Q30154 266 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 ZNF818PQ6ZRF7 136 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 IL17RELQ6ZVW7 336 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 OR4P4Q8NGL7 312 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 DTD1Q8TEA8 209 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 ASB13Q8WXK3 278 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 TBX15Q96SF7 602 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 CHRDL1Q9BU40 450 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 NAA60Q9H7X0 242 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 TMEM160Q9NX00 188 aa6.85□□□□□ -1.31
PTPDC1-201ENST00000288976 TCRBV4S1A1TA0A5B7 111 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 C9JCJ5 164 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 RPL7P18124 248 aaKnown RBP6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 S100A11P31949 105 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 RND2P52198 227 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 PSG5Q15238 335 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 TMEM249Q2WGJ8 235 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 LYG2Q86SG7 212 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 PDPNQ86YL7 162 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 RAX2Q96IS3 184 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 RNF2Q99496 336 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 SLC2A9Q9NRM0 540 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 AURKAIP1Q9NWT8 199 aaPredicted RBP6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 FBN2P35556 2912 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 LY6LH3BQJ8 138 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 RBFOX2O43251 390 aaKnown RBP eCLIP6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 MMP23AO75900 390 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 SFT2D2O95562 160 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 IGKV1D-33P01593 117 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 IGKV1-33P01594 117 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 IZUMO4Q1ZYL8 232 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 AMMECR1LQ6DCA0 310 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 LRTM2Q8N967 370 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 C2orf50Q96LR7 162 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 RNF24Q9Y225 148 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 PPP5D1E7EU14 171 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 JTBO76095 146 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 CD81P60033 236 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 SPANXN1Q5VSR9 72 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 MRAPQ8TCY5 172 aa6.84□□□□□ -1.31
PTPDC1-201ENST00000288976 GCN1Q92616 2671 aaKnown RBP6.84□□□□□ -1.32
PTPDC1-201ENST00000288976 SAA2-SAA4A0A096LPE2 208 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 HSPB1P04792 205 aaKnown RBP6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 SAA2P0DJI9 122 aaPredicted RBP6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 PRB4P10163 310 aaPredicted RBP6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 AMTP48728 403 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 ZNF134P52741 427 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 DRAM1Q8N682 238 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 ELOVL1Q9BW60 279 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 DOCK11Q5JSL3 2073 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 PSMB11A5LHX3 300 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 BUB1B-PAK6H3BSN5 160 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 PGLYRP1O75594 196 aaPredicted RBP6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 RPL8P62917 257 aaKnown RBP6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 PPP1R1AQ13522 171 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 LGALSLQ3ZCW2 172 aaPredicted RBP6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 ST6GALNAC6Q969X2 333 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 A0A1B0GU03 582 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 SYNGR2O43760 224 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 CD5LO43866 347 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 MC5RP33032 325 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 LRRC75BQ2VPJ9 315 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 C5orf24Q7Z6I8 188 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 MMD2Q8IY49 270 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 ADAD2Q8NCV1 583 aaKnown RBP6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 ZNF436Q9C0F3 470 aaPredicted RBP6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 PRNDQ9UKY0 176 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 CR1P17927 2039 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 C9orf170A2RU37 121 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 RAB32Q13637 225 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 GGNBP1Q5YKI7 109 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 C9orf139Q6ZV77 190 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 RBPMSQ93062 196 aaKnown RBP6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 C5orf30Q96GV9 206 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 MMP26Q9NRE1 261 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 TMEM56-RWDD3S4R434 201 aa6.83□□□□□ -1.32
PTPDC1-201ENST00000288976 HSBP1O75506 76 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 FSHBP01225 129 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms