RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 PFDN1O60925 122 aa16.99■□□□□ 0.31
PDLIM3-203ENST00000284771 SUB1P53999 127 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDLIM3-203ENST00000284771 TCTEX1D4Q5JR98 221 aa16.99■□□□□ 0.31
PDLIM3-203ENST00000284771 FXYD6-FXYD2A0A087WZ82 144 aa16.98■□□□□ 0.31
PDLIM3-203ENST00000284771 OR2J3O76001 311 aa16.98■□□□□ 0.31
PDLIM3-203ENST00000284771 BRI3O95415 125 aa16.98■□□□□ 0.31
PDLIM3-203ENST00000284771 NHLH2Q02577 135 aa16.98■□□□□ 0.31
PDLIM3-203ENST00000284771 HIST2H2BDQ6DRA6 164 aa16.98■□□□□ 0.31
PDLIM3-203ENST00000284771 TEX38Q6PEX7 206 aa16.98■□□□□ 0.31
PDLIM3-203ENST00000284771 ZNF546Q86UE3 836 aa16.98■□□□□ 0.31
PDLIM3-203ENST00000284771 OR5AU1Q8NGC0 362 aa16.98■□□□□ 0.31
PDLIM3-203ENST00000284771 BSCL2Q96G97 398 aaPredicted RBP16.98■□□□□ 0.31
PDLIM3-203ENST00000284771 FNDC4Q9H6D8 234 aaPredicted RBP16.98■□□□□ 0.31
PDLIM3-203ENST00000284771 HAX1O00165 279 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 CST7O76096 145 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 NDUFB8O95169 186 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 C1QBP02746 253 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 PF4V1P10720 104 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 RAB9AP51151 201 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 ATP5IP56385 69 aaPredicted RBP16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 RPP30P78346 268 aaKnown RBP16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 SLC35B1P78383 322 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 KIAA0141Q14154 515 aaPredicted RBP16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 TMEM65Q6PI78 240 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 TNFSF18Q9UNG2 199 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 IGHV3-21A0A0B4J1V1 117 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 RNF222A6NCQ9 220 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 IFNA4P05014 189 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 RPL12P30050 165 aaKnown RBP16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 RHOGP84095 191 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 ETV3LQ6ZN32 361 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 PINX1Q96BK5 328 aaKnown RBP16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 MISP3Q96FF7 219 aa16.97■□□□□ 0.31
PDLIM3-203ENST00000284771 H3BUA1 57 aa16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 I3L2K1 104 aa16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 K7EIM0 57 aa16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 IGHV3-48P01763 117 aa16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 RPLP1P05386 114 aaKnown RBP16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 OR8U8P0C7N1 319 aa16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 KRTAP10-3P60369 221 aa16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 EWSR1Q01844 656 aaKnown RBP eCLIP16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 OR8G2PQ6IF36 304 aa16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 RNF152Q8N8N0 203 aa16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 OR1L6Q8NGR2 347 aa16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 FBXL7Q9UJT9 491 aa16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 TENM1Q9UKZ4 2725 aa16.96■□□□□ 0.31
PDLIM3-203ENST00000284771 TMEM89A2RUT3 159 aa16.95■□□□□ 0.3
PDLIM3-203ENST00000284771 ARPC5O15511 151 aa16.95■□□□□ 0.3
PDLIM3-203ENST00000284771 TRGV3P03979 118 aa16.95■□□□□ 0.3
PDLIM3-203ENST00000284771 SULT1A1P50225 295 aa16.95■□□□□ 0.3
PDLIM3-203ENST00000284771 RAB11AP62491 216 aa16.95■□□□□ 0.3
PDLIM3-203ENST00000284771 FOXE3Q13461 319 aa16.95■□□□□ 0.3
PDLIM3-203ENST00000284771 TMEM217Q8N7C4 229 aa16.95■□□□□ 0.3
PDLIM3-203ENST00000284771 S4R3C0 116 aa16.95■□□□□ 0.3
PDLIM3-203ENST00000284771 MFSD2BA6NFX1 497 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 MT-CO2P00403 227 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 ELANEP08246 267 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 TPPP2P59282 170 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 C15orf32Q32M92 178 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 NECAP1Q8NC96 275 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 RNASEH2CQ8TDP1 164 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 SCARB1Q8WTV0 552 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 AQP10Q96PS8 301 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 SLA2Q9H6Q3 261 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 MRPL36Q9P0J6 103 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 HMSDA8MTL9 139 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 HIST1H1BP16401 226 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 NOXA1Q86UR1 476 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 C11orf44Q8N8P7 122 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 MYOZ3Q8TDC0 251 aa16.94■□□□□ 0.3
PDLIM3-203ENST00000284771 OPRK1P41145 380 aa16.93■□□□□ 0.3
PDLIM3-203ENST00000284771 CD69Q07108 199 aa16.93■□□□□ 0.3
PDLIM3-203ENST00000284771 FOXL1Q12952 345 aa16.93■□□□□ 0.3
PDLIM3-203ENST00000284771 SLC25A31Q9H0C2 315 aa16.93■□□□□ 0.3
PDLIM3-203ENST00000284771 A0A1B0GUS0 222 aa16.92■□□□□ 0.3
PDLIM3-203ENST00000284771 CORTO00230 105 aa16.92■□□□□ 0.3
PDLIM3-203ENST00000284771 CD28P10747 220 aa16.92■□□□□ 0.3
PDLIM3-203ENST00000284771 AP2S1P53680 142 aaPredicted RBP16.92■□□□□ 0.3
PDLIM3-203ENST00000284771 COMMD1Q8N668 190 aa16.92■□□□□ 0.3
PDLIM3-203ENST00000284771 OR10P1Q8NGE3 313 aa16.92■□□□□ 0.3
PDLIM3-203ENST00000284771 THYN1Q9P016 225 aa16.92■□□□□ 0.3
PDLIM3-203ENST00000284771 IGHV3-23P01764 117 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 CXCL2P19875 107 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 ZFP69Q49AA0 526 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 AWAT1Q58HT5 328 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 STX12Q86Y82 276 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 INO80EQ8NBZ0 244 aaPredicted RBP16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 OR5C1Q8NGR4 320 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 HYLS1Q96M11 299 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 C19orf24Q9BVV8 132 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 HSPB11Q9Y547 144 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 FAM223BA6NKX1 122 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 F8W735 103 aaPredicted RBP16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 EXOSC2Q13868 293 aaKnown RBP16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 ACOT7LQ6ZUV0 252 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 FAM223AQ8IWN6 122 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 ZNF491Q8N8L2 437 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 MFFQ9GZY8 342 aa16.91■□□□□ 0.3
PDLIM3-203ENST00000284771 CYB5BO43169 146 aa16.9■□□□□ 0.3
PDLIM3-203ENST00000284771 EIF2B2P49770 351 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms