RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 FOXD3Q9UJU5 478 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-201ENST00000282516 VDAC2P45880 294 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-201ENST00000282516 TMEM187Q14656 261 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 OR52E5Q8NH55 327 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 MRPS18AQ9NVS2 196 aaKnown RBP7.42□□□□□ -1.22
NIPBL-201ENST00000282516 FOXA2Q9Y261 457 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-201ENST00000282516 SMPXQ9UHP9 88 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 PEX11BO96011 259 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 LURAP1LQ8IV03 231 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 JMJD8Q96S16 334 aa7.42□□□□□ -1.22
NIPBL-201ENST00000282516 TRGV4A0A0C4DH28 118 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 LEPROTO15243 131 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 TNFRSF6BO95407 300 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 RIPPLY2Q5TAB7 128 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 PPP1R27Q86WC6 154 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 COX5BP10606 129 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 TMEM92Q6UXU6 159 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 LY75O60449 1722 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 IGHV3-49A0A0A0MS15 119 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 CCL4P13236 92 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 LINC00158P58513 81 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 PEAR1Q5VY43 1037 aaPredicted RBP7.41□□□□□ -1.22
NIPBL-201ENST00000282516 LHFPL4Q7Z7J7 247 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 KLF14Q8TD94 323 aaPredicted RBP7.41□□□□□ -1.22
NIPBL-201ENST00000282516 KLF12Q9Y4X4 402 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 HS3ST3B1Q9Y662 390 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 TMEM155Q4W5P6 130 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 C1QTNF12Q5T7M4 302 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 STHQ8IWL8 128 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 OR9G4Q8NGQ1 327 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 ERG28Q9UKR5 140 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 SIGLEC14Q08ET2 396 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 WBP1LQ9NX94 342 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 IGKV1D-42A0A075B6H8 117 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 EFNB1P98172 346 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 LDLRAD2Q5SZI1 272 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 CHCHD1Q96BP2 118 aaKnown RBP7.41□□□□□ -1.22
NIPBL-201ENST00000282516 LEAP2Q969E1 77 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 PLA2G2FQ9BZM2 168 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 CARHSP1Q9Y2V2 147 aaKnown RBP7.41□□□□□ -1.22
NIPBL-201ENST00000282516 IGKCP01834 107 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 CHCHD5Q9BSY4 110 aa7.41□□□□□ -1.22
NIPBL-201ENST00000282516 ITGB1BP1O14713 200 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 ERVK11-1P61568 191 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 LAGE3Q14657 143 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 DLX4Q92988 240 aaPredicted RBP7.4□□□□□ -1.22
NIPBL-201ENST00000282516 DNAJC30Q96LL9 226 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 MARF1Q9Y4F3 1742 aaKnown RBP7.4□□□□□ -1.22
NIPBL-201ENST00000282516 IGKV3D-20A0A0C4DH25 116 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 FHL5Q5TD97 284 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 COQ2Q96H96 371 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 SMAD7O15105 426 aaKnown RBP7.4□□□□□ -1.22
NIPBL-201ENST00000282516 DUSP14O95147 198 aaKnown RBP7.4□□□□□ -1.22
NIPBL-201ENST00000282516 SBF1O95248 1867 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 SFTA2Q6UW10 78 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 GATD1Q8NB37 220 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 TNRC6AQ8NDV7 1962 aaKnown RBP7.4□□□□□ -1.22
NIPBL-201ENST00000282516 SCO2A0A1W2PP80 73 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 CGAP01215 116 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 COL9A1P20849 921 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 RPL39P5Q59GN2 51 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 PILRBQ9UKJ0 227 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 AHDC1Q5TGY3 1603 aaPredicted RBP7.4□□□□□ -1.22
NIPBL-201ENST00000282516 TRBV5-7A0A0A0MS05 114 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 EGR4Q05215 589 aa7.4□□□□□ -1.22
NIPBL-201ENST00000282516 ERVH48-1M5A8F1 160 aa7.4□□□□□ -1.23
NIPBL-201ENST00000282516 FAM19A2Q8N3H0 131 aa7.4□□□□□ -1.23
NIPBL-201ENST00000282516 ABHD17AQ96GS6 310 aa7.4□□□□□ -1.23
NIPBL-201ENST00000282516 IGHV1-45A0A0A0MS14 117 aa7.4□□□□□ -1.23
NIPBL-201ENST00000282516 IGHV3-66A0A0C4DH42 116 aa7.4□□□□□ -1.23
NIPBL-201ENST00000282516 ATXN7O15265 892 aaPredicted RBP7.4□□□□□ -1.23
NIPBL-201ENST00000282516 RBMY1FQ15415 496 aaKnown RBP7.4□□□□□ -1.23
NIPBL-201ENST00000282516 LHFPL6Q9Y693 200 aa7.4□□□□□ -1.23
NIPBL-201ENST00000282516 IGHV3-48P01763 117 aa7.4□□□□□ -1.23
NIPBL-201ENST00000282516 NHLRC3Q5JS37 347 aa7.4□□□□□ -1.23
NIPBL-201ENST00000282516 DRAM1Q8N682 238 aa7.4□□□□□ -1.23
NIPBL-201ENST00000282516 SERF1AO75920 110 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 HAPLN4Q86UW8 402 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 OR5P3Q8WZ94 311 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 PLEKHB2Q96CS7 222 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 GGTLC1Q9BX51 225 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 F2Z2F3 143 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 ZNHIT1O43257 154 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 CT83Q5H943 113 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 IMMP2LQ96T52 175 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 SPAARA0A1B0GVQ0 90 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 ADARB2-AS1A8MUL3 147 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 PAX4O43316 350 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 SUMO4Q6EEV6 95 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 ATP5L2Q7Z4Y8 100 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 ZNF415Q09FC8 603 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 PVRIGQ6DKI7 326 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 TRAV5A0A0B4J249 113 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 IGHV3-35A0A0C4DH35 117 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 IGKV1D-33P01593 117 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 IGKV1-33P01594 117 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 NDUFAF3Q9BU61 184 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 ZNF708P17019 499 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 DRD3P35462 400 aa7.39□□□□□ -1.23
NIPBL-201ENST00000282516 H2BFSP57053 126 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms