RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 RSL24D1Q9UHA3 163 aaKnown RBP10.83□□□□□ -0.68
HMGN3-201ENST00000275036 LYSTQ99698 3801 aa10.83□□□□□ -0.68
HMGN3-201ENST00000275036 IGHV3OR16-8A0A075B7F1 116 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 FABP12A6NFH5 140 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 CDS2O95674 445 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 MT-CO2P00403 227 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 CTSGP08311 255 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 ELLP55199 621 aaPredicted RBP10.82□□□□□ -0.68
HMGN3-201ENST00000275036 Q56UQ5 140 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 CASC10Q5T4H9 136 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 SPSB3Q6PJ21 355 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 DEFB125Q8N687 156 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 TMEM230Q96A57 120 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 CITED4Q96RK1 184 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 NAA60Q9H7X0 242 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 TUBA4BQ9H853 241 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 RETNQ9HD89 108 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 PALMDQ9NP74 551 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 SLC2A8Q9NY64 477 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 MRPL27Q9P0M9 148 aaKnown RBP10.82□□□□□ -0.68
HMGN3-201ENST00000275036 C14orf166Q9Y224 244 aaKnown RBP10.82□□□□□ -0.68
HMGN3-201ENST00000275036 UFC1Q9Y3C8 167 aa10.82□□□□□ -0.68
HMGN3-201ENST00000275036 DNAH1Q9P2D7 4330 aa10.81□□□□□ -0.68
HMGN3-201ENST00000275036 TEX13DA0A0J9YY54 714 aaPredicted RBP10.81□□□□□ -0.68
HMGN3-201ENST00000275036 CRYM-AS1A6NIL9 109 aa10.81□□□□□ -0.68
HMGN3-201ENST00000275036 INS-IGF2F8WCM5 200 aa10.81□□□□□ -0.68
HMGN3-201ENST00000275036 NDUFA4O00483 81 aa10.81□□□□□ -0.68
HMGN3-201ENST00000275036 B3GALNT1O75752 331 aa10.81□□□□□ -0.68
HMGN3-201ENST00000275036 SCAF4O95104 1147 aaKnown RBP10.81□□□□□ -0.68
HMGN3-201ENST00000275036 ETV6P41212 452 aa10.81□□□□□ -0.68
HMGN3-201ENST00000275036 ERHP84090 104 aaKnown RBP10.81□□□□□ -0.68
HMGN3-201ENST00000275036 SELENOHQ8IZQ5 122 aaKnown RBP10.81□□□□□ -0.68
HMGN3-201ENST00000275036 MARC2Q969Z3 335 aa10.81□□□□□ -0.68
HMGN3-201ENST00000275036 PRRT1Q99946 306 aa10.81□□□□□ -0.68
HMGN3-201ENST00000275036 V9GYH0 126 aa10.81□□□□□ -0.68
HMGN3-201ENST00000275036 HYDINQ4G0P3 5121 aa10.8□□□□□ -0.68
HMGN3-201ENST00000275036 RBMY1BA6NDE4 496 aaKnown RBP10.8□□□□□ -0.68
HMGN3-201ENST00000275036 RBMY1EA6NEQ0 496 aaKnown RBP10.8□□□□□ -0.68
HMGN3-201ENST00000275036 CCDC160A6NGH7 325 aa10.8□□□□□ -0.68
HMGN3-201ENST00000275036 OR11H12B2RN74 326 aa10.8□□□□□ -0.68
HMGN3-201ENST00000275036 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
HMGN3-201ENST00000275036 ATG12O94817 140 aa10.8□□□□□ -0.68
HMGN3-201ENST00000275036 IFNA17P01571 189 aa10.8□□□□□ -0.68
HMGN3-201ENST00000275036 RBMY1DP0C7P1 496 aaKnown RBP10.8□□□□□ -0.68
HMGN3-201ENST00000275036 RNASE2P10153 161 aaKnown RBP10.8□□□□□ -0.68
HMGN3-201ENST00000275036 FCGR2BP31994 310 aaPredicted RBP10.8□□□□□ -0.68
HMGN3-201ENST00000275036 PVRIGQ6DKI7 326 aa10.8□□□□□ -0.68
HMGN3-201ENST00000275036 SLC35G3Q8N808 338 aa10.8□□□□□ -0.68
HMGN3-201ENST00000275036 TRIM63Q969Q1 353 aa10.8□□□□□ -0.68
HMGN3-201ENST00000275036 PINX1Q96BK5 328 aaKnown RBP10.8□□□□□ -0.68
HMGN3-201ENST00000275036 RRNAD1Q96FB5 475 aaKnown RBP10.8□□□□□ -0.68
HMGN3-201ENST00000275036 C20orf24Q9BUV8 137 aa10.8□□□□□ -0.68
HMGN3-201ENST00000275036 SRD5A3Q9H8P0 318 aa10.8□□□□□ -0.68
HMGN3-201ENST00000275036 DAZ1Q9NQZ3 744 aaKnown RBP10.8□□□□□ -0.68
HMGN3-201ENST00000275036 PRR13Q9NZ81 148 aa10.8□□□□□ -0.68
HMGN3-201ENST00000275036 MFAP4P55083 255 aa10.79□□□□□ -0.68
HMGN3-201ENST00000275036 KLF9Q13886 244 aaPredicted RBP10.79□□□□□ -0.68
HMGN3-201ENST00000275036 ZNF79Q15937 498 aa10.79□□□□□ -0.68
HMGN3-201ENST00000275036 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
HMGN3-201ENST00000275036 RNASE11Q8TAA1 199 aaKnown RBP10.79□□□□□ -0.68
HMGN3-201ENST00000275036 RBPMSQ93062 196 aaKnown RBP10.79□□□□□ -0.68
HMGN3-201ENST00000275036 GPR146Q96CH1 333 aa10.79□□□□□ -0.68
HMGN3-201ENST00000275036 SPATA25Q9BR10 227 aa10.79□□□□□ -0.68
HMGN3-201ENST00000275036 MCUBQ9NWR8 336 aa10.79□□□□□ -0.68
HMGN3-201ENST00000275036 GAR1Q9NY12 217 aaKnown RBP10.79□□□□□ -0.68
HMGN3-201ENST00000275036 TENM2Q9NT68 2774 aa10.79□□□□□ -0.68
HMGN3-201ENST00000275036 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 SNCAP37840 140 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 HOXA1P49639 335 aaPredicted RBP10.78□□□□□ -0.68
HMGN3-201ENST00000275036 DHODHQ02127 395 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 TMEM187Q14656 261 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 TMEM268Q5VZI3 342 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 FAM219AQ8IW50 185 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 OR52B4Q8NGK2 314 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 TXN2Q99757 166 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 FAM110AQ9BQ89 295 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 PDCD10Q9BUL8 212 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 MRPL36Q9P0J6 103 aaKnown RBP10.78□□□□□ -0.68
HMGN3-201ENST00000275036 SCP2D1Q9UJQ7 156 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 TMEM56-RWDD3S4R434 201 aa10.78□□□□□ -0.68
HMGN3-201ENST00000275036 C15orf62A8K5M9 175 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 K7EMT4 169 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 NUPL2O15504 423 aaKnown RBP10.77□□□□□ -0.69
HMGN3-201ENST00000275036 SUPT4H1P63272 117 aaKnown RBP10.77□□□□□ -0.69
HMGN3-201ENST00000275036 MLANAQ16655 118 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 BSXQ3C1V8 233 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 PYDC2Q56P42 97 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 ZFAND6Q6FIF0 208 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 RBPMS2Q6ZRY4 209 aaKnown RBP10.77□□□□□ -0.69
HMGN3-201ENST00000275036 SLC16A13Q7RTY0 426 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 CCDC190Q86UF4 302 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 GALNT14Q96FL9 552 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 OR10C1Q96KK4 312 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 HIPK2Q9H2X6 1198 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 FNDC4Q9H6D8 234 aaPredicted RBP10.77□□□□□ -0.69
HMGN3-201ENST00000275036 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.77□□□□□ -0.69
HMGN3-201ENST00000275036 CACNG5Q9UF02 275 aa10.77□□□□□ -0.69
HMGN3-201ENST00000275036 PLECQ15149 4684 aaKnown RBP10.77□□□□□ -0.69
HMGN3-201ENST00000275036 TSPAN4O14817 238 aa10.76□□□□□ -0.69
HMGN3-201ENST00000275036 GNG7O60262 68 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms