RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 MRPL20Q9BYC9 149 aaKnown RBP7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 SEPSECSQ9HD40 501 aaKnown RBP7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 TRAV5A0A0B4J249 113 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 MUC21A0A0G2JKD1 596 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 MUC21A0A140T8X8 626 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 SAA1P0DJI8 122 aaPredicted RBP7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 UBE2V1Q13404 147 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 TMEM249Q2WGJ8 235 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 MUC21Q5SSG8 566 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 ZNF688P0C7X2 276 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 SRSF3P84103 164 aaKnown RBP7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 LAGE3Q14657 143 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 CT83Q5H943 113 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 NEU4Q8WWR8 484 aaPredicted RBP7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 TRGV2A0A075B6R0 118 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 IGHV3OR16-13A0A075B7E8 117 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 IGHV3-74A0A0B4J1X5 117 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 OVOL1O14753 267 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 ZNRF1Q8ND25 227 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 FGF11Q92914 225 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 RNF125Q96EQ8 232 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 LOC101059948A0A1B0GTJ6 334 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 A6NNC1 897 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 KLF17Q5JT82 389 aaPredicted RBP7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 FER1L6Q2WGJ9 1857 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 IGHV3-35A0A0C4DH35 117 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 TNFRSF6BO95407 300 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 IGKV1D-33P01593 117 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 IGKV1-33P01594 117 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 GNG5P63218 68 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 ABHD17AQ96GS6 310 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 C4orf51C9J302 202 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 TMEM155Q4W5P6 130 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 BCL6BQ8N143 479 aaPredicted RBP7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 ITLN2Q8WWU7 325 aaPredicted RBP7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 SPSB2Q99619 263 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 GFRA3O60609 400 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 SFTA2Q6UW10 78 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 SPAARA0A1B0GVQ0 90 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 CEACAM1P13688 526 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 TIMP3P35625 211 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 SRSF7Q16629 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 SLC22A18ASQ8N1D0 253 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 REPIN1Q9BWE0 567 aaKnown RBP7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 MRPL27Q9P0M9 148 aaKnown RBP7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 IQCF6A8MYZ5 107 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 CD7P09564 240 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 PRCDQ00LT1 54 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 OR10W1Q8NGF6 305 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 TNRC6CQ9HCJ0 1690 aaKnown RBP7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 PROB1E7EW31 1015 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 NBR2O15453 112 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 CD5LO43866 347 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 ACTL10Q5JWF8 245 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 CLEC19AQ6UXS0 136 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 TMEM167AQ8TBQ9 72 aa7.29□□□□□ -1.24
SCUBE3-201ENST00000274938 IGHV3-66A0A0C4DH42 116 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 IGHV3-23P01764 117 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 C2orf82Q6UX34 121 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 DNAJC30Q96LL9 226 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 TTC3P53804 2025 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 VWC2LB2RUY7 222 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 IL9P15248 144 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 CCL1P22362 96 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 PRTN3P24158 256 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 LINC00114Q6XXX2 140 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 DTX2Q86UW9 622 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 RPRMLQ8N4K4 120 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 FAM89BQ8N5H3 189 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 AGMATQ9BSE5 352 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 ATP5J2P56134 94 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 EFNB3Q15768 340 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 ZIC4Q8N9L1 334 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 SP7Q8TDD2 431 aaPredicted RBP7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 H0YIZ8 118 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 GATA2P23769 480 aaPredicted RBP7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 HIST1H4AP62805 103 aaKnown RBP7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 SCN2AQ99250 2005 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 ZNHIT1O43257 154 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 TDGF1P3P51864 188 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 CD300EQ496F6 205 aaPredicted RBP7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 OCIAD2Q56VL3 154 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 RASL10AQ92737 203 aa7.28□□□□□ -1.24
SCUBE3-201ENST00000274938 SMRP1Q8NCR6 262 aa7.27□□□□□ -1.24
SCUBE3-201ENST00000274938 TPTE2P1Q5T6R2 138 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 C8orf46Q8TAG6 207 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 TRAV8-1A0A0A6YYK1 113 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 CXCL1P09341 107 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 ASCL4Q6XD76 172 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 EVPLQ92817 2033 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 IGHV3-49A0A0A0MS15 119 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 SLC25A39Q9BZJ4 359 aaPredicted RBP7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 WFDC1Q9HC57 220 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 FAM216BQ8N7L0 139 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 AKAP11Q9UKA4 1901 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 SAA2-SAA4A0A096LPE2 208 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 ADARB2-AS1A8MUL3 147 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 PATE3B3GLJ2 98 aa7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 SAA2P0DJI9 122 aaPredicted RBP7.27□□□□□ -1.25
SCUBE3-201ENST00000274938 LINC00158P58513 81 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms