RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 RERGQ96A58 199 aaPredicted RBP7.6□□□□□ -1.19
PDGFC-201ENST00000274071 NXF5Q9H1B4 397 aaKnown RBP7.6□□□□□ -1.19
PDGFC-201ENST00000274071 PRO0461Q9UI25 63 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 TNRC18O15417 2968 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-201ENST00000274071 FABP5P3A8MUU1 101 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 IGLV2-8P01709 118 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 TAS2R45P59539 299 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 RTL8BQ17RB0 113 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 GAGE13Q4V321 117 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 CARD17Q5XLA6 110 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 AMTNQ6UX39 209 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 Q6ZR03 302 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 H1FNTQ75WM6 255 aaPredicted RBP7.59□□□□□ -1.19
PDGFC-201ENST00000274071 FLVCR1-AS1Q8TAF5 88 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 IL36RNQ9UBH0 155 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 COL6A3P12111 3177 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 FAM90A26D6RGX4 464 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 APOMO95445 188 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 NCR2O95944 276 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 GABRG2P18507 467 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 GCHFRP30047 84 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 FXYD2P54710 66 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 ADIPOQQ15848 244 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 PCSK4Q6UW60 755 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 ANKRD37Q7Z713 158 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 ADTRPQ96IZ2 230 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 TRIB1Q96RU8 372 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 LAMA1P25391 3075 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 THADAQ6YHU6 1953 aa7.59□□□□□ -1.19
PDGFC-201ENST00000274071 E9PLD3 99 aa7.59□□□□□ -1.2
PDGFC-201ENST00000274071 KLK10O43240 276 aa7.59□□□□□ -1.2
PDGFC-201ENST00000274071 PPIFP30405 207 aaKnown RBP7.59□□□□□ -1.2
PDGFC-201ENST00000274071 ZNF138P52744 262 aa7.59□□□□□ -1.2
PDGFC-201ENST00000274071 PLP2Q04941 152 aa7.59□□□□□ -1.2
PDGFC-201ENST00000274071 FGFRL1Q8N441 504 aa7.59□□□□□ -1.2
PDGFC-201ENST00000274071 ZNF502Q8TBZ5 544 aa7.59□□□□□ -1.2
PDGFC-201ENST00000274071 IL1F10Q8WWZ1 152 aa7.59□□□□□ -1.2
PDGFC-201ENST00000274071 DGAT2Q96PD7 388 aa7.59□□□□□ -1.2
PDGFC-201ENST00000274071 COL25A1Q9BXS0 654 aaPredicted RBP7.59□□□□□ -1.2
PDGFC-201ENST00000274071 TIMM8BQ9Y5J9 83 aaPredicted RBP7.59□□□□□ -1.2
PDGFC-201ENST00000274071 A0A1B0GWB2 263 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 FOXH1O75593 365 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 CLPSP04118 112 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 CT45A6P0DMU7 189 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 CT45A5P0DMU8 189 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 CT45A7P0DMV0 189 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 PVRP15151 417 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 IGFBP4P22692 258 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 PRSS12P56730 875 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 DIAPH2-AS1Q14236 149 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 CT45A1Q5HYN5 189 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 ZFAND6Q6FIF0 208 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 CT45A3Q8NHU0 189 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 PKIBQ9C010 78 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 WDR83OSQ9Y284 106 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 DIDO1Q9BTC0 2240 aaKnown RBP7.58□□□□□ -1.2
PDGFC-201ENST00000274071 TNFSF14O43557 240 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 ZG16O60844 167 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 IGLV2-14P01704 120 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 RBM11P57052 281 aaKnown RBP7.58□□□□□ -1.2
PDGFC-201ENST00000274071 YPEL5P62699 121 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 RSPO1Q2MKA7 263 aaPredicted RBP7.58□□□□□ -1.2
PDGFC-201ENST00000274071 YRDCQ86U90 279 aaKnown RBP7.58□□□□□ -1.2
PDGFC-201ENST00000274071 TEX29Q8N6K0 151 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 ZNF355PQ9NSJ1 428 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 IDI2-AS1Q9NZ38 188 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 LOXL2Q9Y4K0 774 aa7.58□□□□□ -1.2
PDGFC-201ENST00000274071 A4D1N5 150 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 SCGB2A1O75556 95 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 GCSHP23434 173 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 ESPL1Q14674 2120 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 C3AR1Q16581 482 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 Q6ZSR3 168 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 LCNL1Q6ZST4 164 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 PPP1R32Q7Z5V6 425 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 BCL6BQ8N143 479 aaPredicted RBP7.57□□□□□ -1.2
PDGFC-201ENST00000274071 OR13H1Q8NG92 308 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 Q8TCH9 128 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 GLMPQ8WWB7 406 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 ZDHHC16Q969W1 377 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 PRELID3AQ96N28 172 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 NPIPB13A6NJU9 1138 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 NPIPB4C9JG80 1138 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 C3orf80F5H4A9 247 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 AREGP15514 252 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 OPRK1P41145 380 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 ALKBH6Q3KRA9 238 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 NFE4Q86UQ8 179 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 PCP2Q8IVA1 136 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 PIP4P2Q8N4L2 257 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.57□□□□□ -1.2
PDGFC-201ENST00000274071 BORCS8Q96FH0 119 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 POLDIP2Q9Y2S7 368 aa7.57□□□□□ -1.2
PDGFC-201ENST00000274071 F11RQ9Y624 299 aaKnown RBP7.57□□□□□ -1.2
PDGFC-201ENST00000274071 CHEK1O14757 476 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 IGHV4-34P06331 123 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 BCL3P20749 454 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 G6PCP35575 357 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 CLRN1P58418 232 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 KIR2DS3Q14952 304 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms