RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 PLSCR2Q9NRY7 297 aa9.59□□□□□ -0.87
USP53-201ENST00000274030 TUBGCP6Q96RT7 1819 aa9.59□□□□□ -0.87
USP53-201ENST00000274030 GPR179Q6PRD1 2367 aa9.59□□□□□ -0.87
USP53-201ENST00000274030 FOXF2Q12947 444 aa9.59□□□□□ -0.87
USP53-201ENST00000274030 IL36BQ9NZH7 164 aa9.59□□□□□ -0.87
USP53-201ENST00000274030 TBL2Q9Y4P3 447 aaKnown RBP9.59□□□□□ -0.87
USP53-201ENST00000274030 A0A0G2JLM5 398 aa9.59□□□□□ -0.87
USP53-201ENST00000274030 ATP5IP56385 69 aaPredicted RBP9.59□□□□□ -0.87
USP53-201ENST00000274030 LINC01587Q99440 93 aa9.59□□□□□ -0.87
USP53-201ENST00000274030 IGLV3-12A0A075B6K2 115 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 IGKV3D-20A0A0C4DH25 116 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 A0A1B0GUT8 65 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.58□□□□□ -0.88
USP53-201ENST00000274030 TRBV6-7A0A0A0MS04 114 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 TRBV9A0A0B4J1U6 114 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 VENTXO95231 258 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 COLCA1Q6ZS62 124 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 ANKRD36A6QL64 1941 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 IGKV1D-8A0A087WSZ0 117 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 MEF2CQ06413 473 aaPredicted RBP9.58□□□□□ -0.88
USP53-201ENST00000274030 NRN1LQ496H8 165 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 C1QTNF9BB2RNN3 333 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 ZIC4Q8N9L1 334 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 FOXC2Q99958 501 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 NRXN2Q9P2S2 1712 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 PYYP10082 97 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 PPIFP30405 207 aaKnown RBP9.58□□□□□ -0.88
USP53-201ENST00000274030 GFI1BQ5VTD9 330 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 TCF23Q7RTU1 214 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 TMEM183AQ8IXX5 376 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 SCGB3A1Q96QR1 104 aa9.58□□□□□ -0.88
USP53-201ENST00000274030 SSBP4Q9BWG4 385 aaPredicted RBP9.58□□□□□ -0.88
USP53-201ENST00000274030 SRD5A1P18405 259 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 MORN2Q502X0 79 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 LINC00518Q8N0U6 118 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 PMCHL2Q9BQD1 86 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 PGPEP1LA6NFU8 196 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 SELLP14151 372 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 RNF126Q9BV68 326 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 FREM3P0C091 2139 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 PKDREJQ9NTG1 2253 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 HIGD1CA8MV81 97 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 NBR2O15453 112 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 ERASQ7Z444 233 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 OR4X2Q8NGF9 303 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 NUDT11Q96G61 164 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 RPP21Q9H633 154 aaKnown RBP9.57□□□□□ -0.88
USP53-201ENST00000274030 IGHV1-18A0A0C4DH31 117 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 JOSD1Q15040 202 aaPredicted RBP9.57□□□□□ -0.88
USP53-201ENST00000274030 TRGV2A0A075B6R0 118 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 LOC102723996A0A087X1L8 192 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 BTCP35070 178 aa9.57□□□□□ -0.88
USP53-201ENST00000274030 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
USP53-201ENST00000274030 CHD5Q8TDI0 1954 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 A0A1B0GV90 55 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 UPK2O00526 184 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 C1QTNF9P0C862 333 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 FBLN7Q53RD9 439 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 RNASE6Q93091 150 aaKnown RBP9.56□□□□□ -0.88
USP53-201ENST00000274030 CACNA1HO95180 2353 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 A0A0A6YYD4 124 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 EFNA2O43921 213 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 NDUFA3O95167 84 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 LYPD3O95274 346 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 PAQR4Q8N4S7 273 aaPredicted RBP9.56□□□□□ -0.88
USP53-201ENST00000274030 FER1L6-AS1Q8NA97 138 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 ZNF418Q8TF45 676 aaPredicted RBP9.56□□□□□ -0.88
USP53-201ENST00000274030 PAPPA-AS1Q5QFB9 102 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 RTN4RL2Q86UN3 420 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 DNAL4O96015 105 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 TMEM101Q96IK0 257 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 TMEM133Q9H2Q1 129 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 PLXNA1Q9UIW2 1896 aa9.56□□□□□ -0.88
USP53-201ENST00000274030 MPDZO75970 2070 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 ZFP36L1Q07352 338 aaKnown RBP9.55□□□□□ -0.88
USP53-201ENST00000274030 ZNF497Q6ZNH5 498 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 RNASEH2CQ8TDP1 164 aaKnown RBP9.55□□□□□ -0.88
USP53-201ENST00000274030 KLHDC3Q9BQ90 382 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 DOCK7Q96N67 2140 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 CD33P20138 364 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 OR10W1Q8NGF6 305 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 CACNG8Q8WXS5 425 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 SLC25A28Q96A46 364 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 JKAMPQ9P055 326 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 PRR31Q5SQ13 230 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 CYB5R2Q6BCY4 276 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 TMEM144Q7Z5S9 345 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 LRTM2Q8N967 370 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 C18orf12Q96KH6 178 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 SDF2L1Q9HCN8 221 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 MRPL16Q9NX20 251 aaKnown RBP9.55□□□□□ -0.88
USP53-201ENST00000274030 H0YIZ8 118 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 TIMM23O14925 209 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 YPEL1O60688 119 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 CD7P09564 240 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 OR9G9P0C7N8 305 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 MST1P26927 711 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 FMC1Q96HJ9 113 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 YPEL2Q96QA6 119 aa9.55□□□□□ -0.88
USP53-201ENST00000274030 MRPS18CQ9Y3D5 142 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms