RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ERICH4A6NGS2 130 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 C15orf61A6NNL5 157 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 DEFB4AO15263 64 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 XRCC3O43542 346 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 TFPI2P48307 235 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 TAS2R20P59543 309 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 IZUMO4Q1ZYL8 232 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 Q56UQ5 140 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 LGALS9CQ6DKI2 356 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 THOC7Q6I9Y2 204 aaKnown RBP6.53□□□□□ -1.36
TPM3-201ENST00000271850 HSD17B13Q7Z5P4 300 aaPredicted RBP6.53□□□□□ -1.36
TPM3-201ENST00000271850 STPG3Q8N7X2 389 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 OR1P1Q8NH06 330 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 DGCR14Q96DF8 476 aaKnown RBP6.53□□□□□ -1.36
TPM3-201ENST00000271850 SEC22AQ96IW7 307 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 AIFM2Q9BRQ8 373 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 MRPL36Q9P0J6 103 aaKnown RBP6.53□□□□□ -1.36
TPM3-201ENST00000271850 AGRNO00468 2067 aa6.53□□□□□ -1.36
TPM3-201ENST00000271850 OR4C46A6NHA9 309 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 NUPL2O15504 423 aaKnown RBP6.52□□□□□ -1.37
TPM3-201ENST00000271850 MT-CO2P00403 227 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 P0C879 139 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 HRH1P35367 487 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 RPS19P39019 145 aaKnown RBP6.52□□□□□ -1.37
TPM3-201ENST00000271850 CBX5P45973 191 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 HERV-K104P61576 105 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 NEDD8Q15843 81 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 PHLDA2Q53GA4 152 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 LAMTOR1Q6IAA8 161 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 GBGT1Q8N5D6 347 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 ZNF114Q8NC26 417 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 TMEM116Q8NCL8 245 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 ST8SIA2Q92186 375 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 NXF2Q9GZY0 626 aaKnown RBP6.52□□□□□ -1.37
TPM3-201ENST00000271850 CSTL1Q9H114 145 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 VCX3BQ9H321 246 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 C11orf68Q9H3H3 251 aaKnown RBP6.52□□□□□ -1.37
TPM3-201ENST00000271850 VSIRQ9H7M9 311 aa6.52□□□□□ -1.37
TPM3-201ENST00000271850 IGHV3-66A0A0C4DH42 116 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 A0A1B0GU03 582 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 GPR31O00270 319 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 ATP6V1G2O95670 118 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 EIF4EP06730 217 aaKnown RBP6.51□□□□□ -1.37
TPM3-201ENST00000271850 HLA-DMAP28067 261 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 ERVK-16P61578 105 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 PRCDQ00LT1 54 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 SPINK9Q5DT21 86 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 LEMD1Q68G75 181 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 PVRIGQ6DKI7 326 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 TOMM20LQ6UXN7 152 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 TBC1D26Q86UD7 250 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 Q8NAQ8 132 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 OR11H2Q8NH07 326 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 GPX8Q8TED1 209 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 SLC25A46Q96AG3 418 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 MRGPRFQ96AM1 343 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 RARRES2Q99969 163 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 IFT46Q9NQC8 304 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 DIABLOQ9NR28 239 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 PRNDQ9UKY0 176 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 APLNQ9ULZ1 77 aa6.51□□□□□ -1.37
TPM3-201ENST00000271850 KLK5Q9Y337 293 aaPredicted RBP6.51□□□□□ -1.37
TPM3-201ENST00000271850 MPTX1A8MV57 137 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 EREGO14944 169 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 DFFBO76075 338 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 IGKV1-5P01602 117 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 RBMY1A1P0DJD3 496 aaKnown RBP6.5□□□□□ -1.37
TPM3-201ENST00000271850 RBMY1CP0DJD4 496 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 C4BPBP20851 252 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 RBMY1FQ15415 496 aaKnown RBP6.5□□□□□ -1.37
TPM3-201ENST00000271850 UBE2NLQ5JXB2 153 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 TCF24Q7RTU0 167 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 SAMD12Q8N8I0 201 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 OR5H2Q8NGV7 314 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 GATAD1Q8WUU5 269 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 YIPF6Q96EC8 236 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 YTHDF1Q9BYJ9 559 aaKnown RBP6.5□□□□□ -1.37
TPM3-201ENST00000271850 MS4A6AQ9H2W1 248 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 FNDC4Q9H6D8 234 aaPredicted RBP6.5□□□□□ -1.37
TPM3-201ENST00000271850 FBXL17Q9UF56 701 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 ABCA13Q86UQ4 5058 aa6.5□□□□□ -1.37
TPM3-201ENST00000271850 TRAV14DV4A0A0A6YYC5 116 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 A0A0B4J293 547 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 A0A0G2JRQ6 117 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 YIF1AO95070 293 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 CA1P00915 261 aaPredicted RBP6.49□□□□□ -1.37
TPM3-201ENST00000271850 MFAP4P55083 255 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 DEFB131AP59861 70 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 LSM3P62310 102 aaKnown RBP6.49□□□□□ -1.37
TPM3-201ENST00000271850 RELQ04864 619 aaPredicted RBP6.49□□□□□ -1.37
TPM3-201ENST00000271850 TMEM69Q5SWH9 247 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 C11orf45Q8TAV5 145 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 TMEM56Q96MV1 263 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 TXN2Q99757 166 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 SCRT1Q9BWW7 348 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 FAM212BQ9NTI7 297 aaPredicted RBP6.49□□□□□ -1.37
TPM3-201ENST00000271850 PUS1Q9Y606 427 aaKnown RBP eCLIP6.49□□□□□ -1.37
TPM3-201ENST00000271850 X6R8D5 127 aa6.49□□□□□ -1.37
TPM3-201ENST00000271850 A6NHS1 94 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms