RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 TFPI2P48307 235 aa12.92□□□□□ -0.34
CSNK1D-201ENST00000269361 CMC4P56277 68 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-201ENST00000269361 RND3P61587 244 aa12.92□□□□□ -0.34
CSNK1D-201ENST00000269361 IZUMO4Q1ZYL8 232 aa12.92□□□□□ -0.34
CSNK1D-201ENST00000269361 LINC00476Q8WZB0 136 aa12.92□□□□□ -0.34
CSNK1D-201ENST00000269361 C6orf62Q9GZU0 229 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-201ENST00000269361 FAM25AB3EWG3 89 aa12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 FAM25CB3EWG5 89 aa12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 FAM25GB3EWG6 89 aa12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 GNG7O60262 68 aa12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 PGAM2P15259 253 aa12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 PI3P19957 117 aa12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 SPINK9Q5DT21 86 aa12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 FAM90A2PQ658T7 463 aa12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 MZT2AQ6P582 158 aa12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 CEMP1Q6PRD7 247 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 ZNF486Q96H40 463 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 KLK11Q9UBX7 282 aa12.91□□□□□ -0.34
CSNK1D-201ENST00000269361 IGKV3-7A0A075B6H7 116 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 IGHV3OR16-13A0A075B7E8 117 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 IGHV3-74A0A0B4J1X5 117 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 A0A0B4J293 547 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 IGKV1-5P01602 117 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 SNCAP37840 140 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 PIGPP57054 158 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 ZNF124Q15973 351 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 RNASE12Q5GAN4 147 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 RNASE10Q5GAN6 216 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 TOMM20LQ6UXN7 152 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 LHFPL1Q86WI0 220 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 TMEM217Q8N7C4 229 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 DUSP18Q8NEJ0 188 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 TP53RKQ96S44 253 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 CSTL1Q9H114 145 aa12.9□□□□□ -0.34
CSNK1D-201ENST00000269361 LY6G6CO95867 125 aa12.89□□□□□ -0.35
CSNK1D-201ENST00000269361 CD3DP04234 171 aa12.89□□□□□ -0.35
CSNK1D-201ENST00000269361 P0C879 139 aa12.89□□□□□ -0.35
CSNK1D-201ENST00000269361 NPBWR1P48145 328 aa12.89□□□□□ -0.35
CSNK1D-201ENST00000269361 GBGT1Q8N5D6 347 aa12.89□□□□□ -0.35
CSNK1D-201ENST00000269361 ARRDC1Q8N5I2 433 aa12.89□□□□□ -0.35
CSNK1D-201ENST00000269361 OR52I2Q8NH67 350 aa12.89□□□□□ -0.35
CSNK1D-201ENST00000269361 GINS3Q9BRX5 216 aa12.89□□□□□ -0.35
CSNK1D-201ENST00000269361 C3orf85A0A1B0GTC6 90 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 MPTX1A8MV57 137 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 INS-IGF2F8WCM5 200 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 ST8SIA3O43173 380 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 ATG12O94817 140 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 IFNA17P01571 189 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 CD5P06127 495 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 TBPP20226 339 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 AKR1C2P52895 323 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 PAFAH1B2P68402 229 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 TCF24Q7RTU0 167 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 SLC35G3Q8N808 338 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 AP3S1Q92572 193 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 MTFP1Q9UDX5 166 aa12.88□□□□□ -0.35
CSNK1D-201ENST00000269361 APOHP02749 345 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 ZNF182P17025 639 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 ETV6P41212 452 aa12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 CTF1Q16619 201 aa12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 PVRIGQ6DKI7 326 aa12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 ZNF600Q6ZNG1 722 aa12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 LILRB2Q8N423 598 aa12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 ST8SIA2Q92186 375 aa12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 ABHD1Q96SE0 405 aa12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 VSIRQ9H7M9 311 aa12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 EXTL2Q9UBQ6 330 aa12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 KLK5Q9Y337 293 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-201ENST00000269361 TMEM50AO95807 157 aa12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 SUB1P53999 127 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 TRIM16LQ309B1 348 aa12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 SP6Q3SY56 376 aa12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 OR4D10Q8NGI6 311 aa12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 TERB2Q8NHR7 220 aa12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 ZFAND1Q8TCF1 268 aa12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 GATAD1Q8WUU5 269 aa12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 PDCD10Q9BUL8 212 aa12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 NAA50Q9GZZ1 169 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 ZFAND3Q9H8U3 227 aa12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 COPZ2Q9P299 210 aa12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 PUS1Q9Y606 427 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSNK1D-201ENST00000269361 IGHV3-66A0A0C4DH42 116 aa12.85□□□□□ -0.35
CSNK1D-201ENST00000269361 A0A1B0GU03 582 aa12.85□□□□□ -0.35
CSNK1D-201ENST00000269361 DFFBO76075 338 aa12.85□□□□□ -0.35
CSNK1D-201ENST00000269361 GABARAPO95166 117 aa12.85□□□□□ -0.35
CSNK1D-201ENST00000269361 RNASE2P10153 161 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-201ENST00000269361 PPP5CP53041 499 aa12.85□□□□□ -0.35
CSNK1D-201ENST00000269361 CCDC71LQ8N9Z2 235 aa12.85□□□□□ -0.35
CSNK1D-201ENST00000269361 C15orf40Q8WUR7 153 aa12.85□□□□□ -0.35
CSNK1D-201ENST00000269361 RARRES2Q99969 163 aa12.85□□□□□ -0.35
CSNK1D-201ENST00000269361 MS4A6AQ9H2W1 248 aa12.85□□□□□ -0.35
CSNK1D-201ENST00000269361 DNASE2O00115 360 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-201ENST00000269361 CORTO00230 105 aa12.84□□□□□ -0.35
CSNK1D-201ENST00000269361 CD74P04233 296 aa12.84□□□□□ -0.35
CSNK1D-201ENST00000269361 HOXA1P49639 335 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-201ENST00000269361 RPL11P62913 178 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-201ENST00000269361 SCGB2B2Q4G0G5 96 aa12.84□□□□□ -0.35
CSNK1D-201ENST00000269361 TMEM229BQ8NBD8 167 aa12.84□□□□□ -0.35
CSNK1D-201ENST00000269361 OR13C8Q8NGS7 320 aa12.84□□□□□ -0.35
CSNK1D-201ENST00000269361 PHLDA1Q8WV24 401 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms