RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 GJC3Q8NFK1 279 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 SSMEM1Q8WWF3 244 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 C5orf30Q96GV9 206 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 HES7Q9BYE0 225 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 KCNS2Q9ULS6 477 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 A0A0G2JMM0 328 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 A0A1W2PPB8 328 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 C9orf118A6NHY6 69 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 KIR3DP1A8MWS1 328 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 IGLV2-8P01709 118 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 BOD1L2Q8IYS8 172 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 FGFBP3Q8TAT2 258 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 BLNKQ8WV28 456 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 LINC00479Q96M42 142 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 PSG11Q9UQ72 335 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 FREM1Q5H8C1 2179 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 IGHV1-24A0A0C4DH33 117 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 NTN3O00634 580 aaPredicted RBP7.24□□□□□ -1.25
VAPB-201ENST00000265619 KLF7O75840 302 aaPredicted RBP7.24□□□□□ -1.25
VAPB-201ENST00000265619 IGHV3-9P01782 118 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 APOA2P02652 100 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 HTR1DP28221 377 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 BRWD1-AS2P59051 145 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 RPL30P62888 115 aaKnown RBP7.24□□□□□ -1.25
VAPB-201ENST00000265619 HSD52Q0P140 79 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 OR2K2Q8NGT1 345 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 C1orf159Q96HA4 380 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 ZNF391Q9UJN7 358 aa7.24□□□□□ -1.25
VAPB-201ENST00000265619 TANC2Q9HCD6 1990 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 MT-ND6P03923 174 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 IGFBP2P18065 325 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 SSR4P51571 173 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 HIST1H1AQ02539 215 aaPredicted RBP7.23□□□□□ -1.25
VAPB-201ENST00000265619 ATP5G2Q06055 141 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 PCOLCEQ15113 449 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 C9orf135Q5VTT2 229 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 NFAM1Q8NET5 270 aaPredicted RBP7.23□□□□□ -1.25
VAPB-201ENST00000265619 POM121L2Q96KW2 1035 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 A0A0G2JLM5 398 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 K7EMI3 77 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 CRYGSP22914 178 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 TMEM97Q5BJF2 176 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 TMEM42Q69YG0 159 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 OR10AG1Q8NH19 301 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 MGST2Q99735 147 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 ZFHX4Q86UP3 3567 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 A0A1W2PNU3 283 aaPredicted RBP7.23□□□□□ -1.25
VAPB-201ENST00000265619 C15orf62A8K5M9 175 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 NCR2O95944 276 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 HLA-DQA1P01909 254 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 COX6A1P12074 109 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 GCHFRP30047 84 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 CAMPP49913 170 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 KIR3DS1Q14943 382 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 MRPL14Q6P1L8 145 aaKnown RBP7.23□□□□□ -1.25
VAPB-201ENST00000265619 Q6ZS49 121 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 ZNF441Q8N8Z8 693 aa7.23□□□□□ -1.25
VAPB-201ENST00000265619 IGHV1-45A0A0A0MS14 117 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 SMIM27A0A1W2PRY6 76 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 GAGE12HA6NDE8 117 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 TNFSF11O14788 317 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 SYNGR1O43759 233 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 P04436 131 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 INSL3P51460 131 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 RAB31Q13636 194 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 SPATA46Q5T0L3 261 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 GTF2H5Q6ZYL4 71 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 MTURNQ8N3F0 131 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 CHRNA10Q9GZZ6 450 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 TRGV10A0A0A0MS01 117 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 NEURL1O76050 574 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 CELA3AP09093 270 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 CA6P23280 308 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 NTF4P34130 210 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 GNG4P50150 75 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 FABP6P51161 128 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 MFAP2P55001 183 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 FAM214BQ7L5A3 538 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 DRAM1Q8N682 238 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 SS18L2Q9UHA2 77 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 SPCS1Q9Y6A9 102 aa7.22□□□□□ -1.25
VAPB-201ENST00000265619 CRXO43186 299 aaPredicted RBP7.21□□□□□ -1.25
VAPB-201ENST00000265619 ACP1P24666 158 aa7.21□□□□□ -1.25
VAPB-201ENST00000265619 GPM6AP51674 278 aa7.21□□□□□ -1.25
VAPB-201ENST00000265619 C3AR1Q16581 482 aa7.21□□□□□ -1.25
VAPB-201ENST00000265619 WIPI1Q5MNZ9 446 aaPredicted RBP7.21□□□□□ -1.25
VAPB-201ENST00000265619 ST8SIA1Q92185 356 aa7.21□□□□□ -1.25
VAPB-201ENST00000265619 JKAMPQ9P055 326 aa7.21□□□□□ -1.25
VAPB-201ENST00000265619 RABAC1Q9UI14 185 aa7.21□□□□□ -1.25
VAPB-201ENST00000265619 HCFC1P51610 2035 aa7.21□□□□□ -1.25
VAPB-201ENST00000265619 TLN1Q9Y490 2541 aaKnown RBP7.21□□□□□ -1.25
VAPB-201ENST00000265619 LRRC30A6NM36 301 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 C9JCJ5 164 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 SYNGR3O43761 229 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 ZIC3O60481 467 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 ACTL6BO94805 426 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 HIST1H1EP10412 219 aaKnown RBP7.21□□□□□ -1.26
VAPB-201ENST00000265619 CCL11P51671 97 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 PLGLB1Q02325 96 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 TMEM177Q53S58 311 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms