RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 SLC16A13Q7RTY0 426 aa12.61□□□□□ -0.39
VPS26A-201ENST00000263559 OR2T10Q8NGZ9 312 aa12.61□□□□□ -0.39
VPS26A-201ENST00000263559 RNASEH2CQ8TDP1 164 aaKnown RBP12.61□□□□□ -0.39
VPS26A-201ENST00000263559 SRSF12Q8WXF0 261 aaKnown RBP12.61□□□□□ -0.39
VPS26A-201ENST00000263559 SVEP1Q4LDE5 3571 aa12.61□□□□□ -0.39
VPS26A-201ENST00000263559 SEC14L6B5MCN3 397 aa12.61□□□□□ -0.39
VPS26A-201ENST00000263559 NDUFA3O95167 84 aa12.61□□□□□ -0.39
VPS26A-201ENST00000263559 RPL29P47914 159 aaKnown RBP12.61□□□□□ -0.39
VPS26A-201ENST00000263559 C19orf35Q6ZS72 473 aa12.61□□□□□ -0.39
VPS26A-201ENST00000263559 STPG3Q8N7X2 389 aa12.61□□□□□ -0.39
VPS26A-201ENST00000263559 SNAPINO95295 136 aa12.6□□□□□ -0.39
VPS26A-201ENST00000263559 BCL2P10415 239 aa12.6□□□□□ -0.39
VPS26A-201ENST00000263559 COL8A1P27658 744 aa12.6□□□□□ -0.39
VPS26A-201ENST00000263559 NPBWR1P48145 328 aa12.6□□□□□ -0.39
VPS26A-201ENST00000263559 PAX8Q06710 450 aa12.6□□□□□ -0.39
VPS26A-201ENST00000263559 MRPL41Q8IXM3 137 aaKnown RBP12.6□□□□□ -0.39
VPS26A-201ENST00000263559 MALSU1Q96EH3 234 aa12.6□□□□□ -0.39
VPS26A-201ENST00000263559 KCNIP2Q9NS61 270 aa12.6□□□□□ -0.39
VPS26A-201ENST00000263559 HSPB1P04792 205 aaKnown RBP12.6□□□□□ -0.39
VPS26A-201ENST00000263559 SAA4P35542 130 aa12.6□□□□□ -0.39
VPS26A-201ENST00000263559 MFAP2P55001 183 aa12.6□□□□□ -0.39
VPS26A-201ENST00000263559 SLC45A2Q9UMX9 530 aa12.6□□□□□ -0.39
VPS26A-201ENST00000263559 IGHV3-48P01763 117 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 LINC00869P0C866 280 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 PRR20EP86478 221 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 PRR20CP86479 221 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 PRR20DP86480 221 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 PRR20BP86481 221 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 PRR20AP86496 221 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 ZNF114Q8NC26 417 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 ACY3Q96HD9 319 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 SLC35E1Q96K37 410 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 CENPVL3A0A0U1RRI6 287 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 A0A1W2PPV4 95 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 CNIH1O95406 144 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 PAX1P15863 534 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 OR10J1P30954 320 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 EBI3Q14213 229 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 PVRIGQ6DKI7 326 aa12.59□□□□□ -0.39
VPS26A-201ENST00000263559 NUPL2O15504 423 aaKnown RBP12.58□□□□□ -0.4
VPS26A-201ENST00000263559 GATA2P23769 480 aaPredicted RBP12.58□□□□□ -0.4
VPS26A-201ENST00000263559 PMS2P11Q13670 270 aa12.58□□□□□ -0.4
VPS26A-201ENST00000263559 C5orf64Q2M2E5 130 aa12.58□□□□□ -0.4
VPS26A-201ENST00000263559 SOHLH1Q5JUK2 328 aa12.58□□□□□ -0.4
VPS26A-201ENST00000263559 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
VPS26A-201ENST00000263559 Q8N6K4 173 aa12.58□□□□□ -0.4
VPS26A-201ENST00000263559 DNASE2O00115 360 aaPredicted RBP12.58□□□□□ -0.4
VPS26A-201ENST00000263559 CEBPGP53567 150 aa12.58□□□□□ -0.4
VPS26A-201ENST00000263559 CYB561D1Q8N8Q1 229 aa12.58□□□□□ -0.4
VPS26A-201ENST00000263559 CLRN3Q8NCR9 226 aa12.58□□□□□ -0.4
VPS26A-201ENST00000263559 MISP3Q96FF7 219 aa12.58□□□□□ -0.4
VPS26A-201ENST00000263559 MRPL36Q9P0J6 103 aaKnown RBP12.58□□□□□ -0.4
VPS26A-201ENST00000263559 FAM74A7A6NL05 159 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 NPFFO15130 113 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 IFNA1P01562 189 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 FAM74A3Q4VXF1 159 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 IQCF2Q8IXL9 164 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 OR1P1Q8NH06 330 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 GATAD1Q8WUU5 269 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 TMA7Q9Y2S6 64 aaKnown RBP12.57□□□□□ -0.4
VPS26A-201ENST00000263559 FBN2P35556 2912 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 NCBP2LA6PVI3 153 aaKnown RBP12.57□□□□□ -0.4
VPS26A-201ENST00000263559 FAM120AOSQ5T036 256 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 RBMS3Q6XE24 437 aaKnown RBP12.57□□□□□ -0.4
VPS26A-201ENST00000263559 SLC35E3Q7Z769 313 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 ABHD5Q8WTS1 349 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 NPIPB3Q92617 1050 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 SEPSECSQ9HD40 501 aaKnown RBP12.57□□□□□ -0.4
VPS26A-201ENST00000263559 VAX2Q9UIW0 290 aa12.57□□□□□ -0.4
VPS26A-201ENST00000263559 TMEM11P17152 192 aa12.56□□□□□ -0.4
VPS26A-201ENST00000263559 FXYD3Q14802 87 aa12.56□□□□□ -0.4
VPS26A-201ENST00000263559 RUSC1-AS1Q66K80 236 aa12.56□□□□□ -0.4
VPS26A-201ENST00000263559 SUN5Q8TC36 379 aa12.56□□□□□ -0.4
VPS26A-201ENST00000263559 DMRT1Q9Y5R6 373 aa12.56□□□□□ -0.4
VPS26A-201ENST00000263559 F11RQ9Y624 299 aaKnown RBP12.56□□□□□ -0.4
VPS26A-201ENST00000263559 CELSR2Q9HCU4 2923 aa12.56□□□□□ -0.4
VPS26A-201ENST00000263559 DSCR9P59020 149 aa12.56□□□□□ -0.4
VPS26A-201ENST00000263559 SLC25A33Q9BSK2 321 aa12.56□□□□□ -0.4
VPS26A-201ENST00000263559 FAM103A1Q9BTL3 118 aaKnown RBP12.56□□□□□ -0.4
VPS26A-201ENST00000263559 CRYGCP07315 174 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 KRTAP10-9P60411 292 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 CLEC12BQ2HXU8 276 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 SPATA31B1PQ5VZV4 182 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 IGHV3OR16-10A0A075B7F0 116 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 FAM106CPP0CH98 169 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 STAG3L2P0CL84 134 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 STAG3L3P0CL85 134 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 TMEM88Q6PEY1 159 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 SRSF8Q9BRL6 282 aaKnown RBP12.55□□□□□ -0.4
VPS26A-201ENST00000263559 CSMD2Q7Z408 3487 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 IGKV1D-37A0A075B6S9 117 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 IGHV3-21A0A0B4J1V1 117 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 RND2P52198 227 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 TMEM249Q2WGJ8 235 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 AKIRIN2Q53H80 203 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 ETFRF1Q6IPR1 90 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 CYP2G1PQ6ZSU1 146 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 C20orf24Q9BUV8 137 aa12.55□□□□□ -0.4
VPS26A-201ENST00000263559 MAP1AP78559 2803 aaPredicted RBP12.54□□□□□ -0.4
VPS26A-201ENST00000263559 KMT2BQ9UMN6 2715 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms