RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SSX3Q99909 188 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 PARD6GQ9BYG4 376 aaPredicted RBP10.5□□□□□ -0.73
SGCA-201ENST00000262018 NPFFR1Q9GZQ6 430 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 PRNDQ9UKY0 176 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 TCF19Q9Y242 345 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 TBL2Q9Y4P3 447 aaKnown RBP10.5□□□□□ -0.73
SGCA-201ENST00000262018 IGHV1-3A0A0C4DH29 117 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 ZNF705EA8MWA4 302 aaPredicted RBP10.5□□□□□ -0.73
SGCA-201ENST00000262018 SOX15O60248 233 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 IFNA17P01571 189 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 PF4P02776 101 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 HTR1DP28221 377 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 VDAC2P45880 294 aaPredicted RBP10.5□□□□□ -0.73
SGCA-201ENST00000262018 HSPE1P61604 102 aaKnown RBP10.5□□□□□ -0.73
SGCA-201ENST00000262018 EGFEM1PQ0D2K5 195 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 PJVKQ0ZLH3 352 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 CLINT1Q14677 625 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 TPTE2P1Q5T6R2 138 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 MINOS1Q5TGZ0 78 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 OR4A5Q8NH83 315 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 RPEQ96AT9 228 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 RBMXL1Q96E39 390 aaKnown RBP10.5□□□□□ -0.73
SGCA-201ENST00000262018 ATP5SQ99766 215 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 DPM3Q9P2X0 92 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 ZNF257Q9Y2Q1 563 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 MINOS1-NBL1R4GNA1 71 aa10.5□□□□□ -0.73
SGCA-201ENST00000262018 KBTBD11O94819 623 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 IGLV2-23P01705 113 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 OR8U8P0C7N1 319 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 METTL15P1P0C7V9 234 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 LGALS7P47929 136 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 RPS16P62249 146 aaKnown RBP10.49□□□□□ -0.73
SGCA-201ENST00000262018 ARL16Q0P5N6 197 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 LDLRAD2Q5SZI1 272 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 TMEM217Q8N7C4 229 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 VSTM2AQ8TAG5 236 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 CLCC1Q96S66 551 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 SERTAD4Q9NUC0 356 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 FKBP11Q9NYL4 201 aa10.49□□□□□ -0.73
SGCA-201ENST00000262018 A0A1W2PPI3 338 aa10.48□□□□□ -0.73
SGCA-201ENST00000262018 PMS2P5A8MQ11 134 aa10.48□□□□□ -0.73
SGCA-201ENST00000262018 CEACAM3P40198 252 aa10.48□□□□□ -0.73
SGCA-201ENST00000262018 RAB2AP61019 212 aa10.48□□□□□ -0.73
SGCA-201ENST00000262018 SPINK9Q5DT21 86 aa10.48□□□□□ -0.73
SGCA-201ENST00000262018 MOB3BQ86TA1 216 aa10.48□□□□□ -0.73
SGCA-201ENST00000262018 TMEM167AQ8TBQ9 72 aa10.48□□□□□ -0.73
SGCA-201ENST00000262018 DPF1Q92782 380 aa10.48□□□□□ -0.73
SGCA-201ENST00000262018 MALSU1Q96EH3 234 aa10.48□□□□□ -0.73
SGCA-201ENST00000262018 TSNAXQ99598 290 aaKnown RBP10.48□□□□□ -0.73
SGCA-201ENST00000262018 OR51B2Q9Y5P1 312 aa10.48□□□□□ -0.73
SGCA-201ENST00000262018 IGHV3-72A0A0B4J1Y9 119 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 C15orf62A8K5M9 175 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 OOSP1A8MZH6 123 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 RPP30P78346 268 aaKnown RBP10.47□□□□□ -0.73
SGCA-201ENST00000262018 ATP6V1FQ16864 119 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 VMA21Q3ZAQ7 101 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 PXDC1Q5TGL8 231 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 LHFPL4Q7Z7J7 247 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 SVBPQ8N300 66 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 AJUBAQ96IF1 538 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 RNF5Q99942 180 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 PBDC1Q9BVG4 233 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 ZNF702PQ9H963 129 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 PLA2G2EQ9NZK7 142 aa10.47□□□□□ -0.73
SGCA-201ENST00000262018 TEX50A0A1B0GTY4 177 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 A0A1B0GW64 132 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 IFNA5P01569 189 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 CD1BP29016 333 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 HOXA1P49639 335 aaPredicted RBP10.46□□□□□ -0.74
SGCA-201ENST00000262018 PRCDQ00LT1 54 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 SLC38A11Q08AI6 406 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 LRRC75BQ2VPJ9 315 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 TEX45Q8NA69 505 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 HSD17B11Q8NBQ5 300 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 OR5B3Q8NH48 314 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 SUN5Q8TC36 379 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 WIPF2Q8TF74 440 aaPredicted RBP10.46□□□□□ -0.74
SGCA-201ENST00000262018 C17orf50Q8WW18 174 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 ASCL2Q99929 193 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 SEC11CQ9BY50 192 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 MEGF9Q9H1U4 602 aa10.46□□□□□ -0.74
SGCA-201ENST00000262018 HEYLQ9NQ87 328 aaPredicted RBP10.46□□□□□ -0.74
SGCA-201ENST00000262018 TMEM218A2RU14 115 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 CRYGBP07316 175 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 MYOD1P15172 320 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 ATP6V0CP27449 155 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 RPL8P62917 257 aaKnown RBP10.45□□□□□ -0.74
SGCA-201ENST00000262018 SERF2P84101 59 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 SSX2Q16385 188 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 C10orf91Q5T1B1 145 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 THNSL2Q86YJ6 484 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 LILRB2Q8N423 598 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 OR10P1Q8NGE3 313 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 PINX1Q96BK5 328 aaKnown RBP10.45□□□□□ -0.74
SGCA-201ENST00000262018 RITA1Q96K30 269 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 PSMG3Q9BT73 122 aaPredicted RBP10.45□□□□□ -0.74
SGCA-201ENST00000262018 SH3BGRL3Q9H299 93 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 ENY2Q9NPA8 101 aa10.45□□□□□ -0.74
SGCA-201ENST00000262018 CARHSP1Q9Y2V2 147 aaKnown RBP10.45□□□□□ -0.74
SGCA-201ENST00000262018 INS-IGF2F8WCM5 200 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms