RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 FBXL7Q9UJT9 491 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 HIGD1AQ9Y241 93 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 ABCA4P78363 2273 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 DEFB109BQ30KR1 87 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 SPOCK3Q9BQ16 436 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 UNC80Q8N2C7 3258 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 GPR183P32249 361 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 PSG7Q13046 419 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 SRSF7Q16629 238 aaKnown RBP eCLIP13.53□□□□□ -0.241e-6■■□□□ 12.8
SREBF1-201ENST00000261646 Q1RN00 199 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 ZNF585BQ52M93 769 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 ZNF703Q9H7S9 590 aaPredicted RBP13.53□□□□□ -0.24
SREBF1-201ENST00000261646 MOSP00540 346 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 ATP1A1-AS1Q5TC04 95 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 GOLT1AQ6ZVE7 132 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 ORAOV1Q8WV07 137 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 ITLN1Q8WWA0 313 aa13.53□□□□□ -0.24
SREBF1-201ENST00000261646 SNRNP40Q96DI7 357 aaKnown RBP13.53□□□□□ -0.24
SREBF1-201ENST00000261646 MRPL32Q9BYC8 188 aaKnown RBP13.53□□□□□ -0.24
SREBF1-201ENST00000261646 KLF7O75840 302 aaPredicted RBP13.52□□□□□ -0.24
SREBF1-201ENST00000261646 ASCL4Q6XD76 172 aa13.52□□□□□ -0.24
SREBF1-201ENST00000261646 ACP7Q6ZNF0 438 aa13.52□□□□□ -0.24
SREBF1-201ENST00000261646 LINC00305Q7Z4B0 112 aa13.52□□□□□ -0.24
SREBF1-201ENST00000261646 MRPL52Q86TS9 123 aaKnown RBP13.52□□□□□ -0.24
SREBF1-201ENST00000261646 TRAV17A0A0B4J275 112 aa13.52□□□□□ -0.25
SREBF1-201ENST00000261646 APOHP02749 345 aaPredicted RBP13.52□□□□□ -0.25
SREBF1-201ENST00000261646 TYMSP04818 313 aa13.52□□□□□ -0.25
SREBF1-201ENST00000261646 PNKDQ8N490 385 aa13.52□□□□□ -0.25
SREBF1-201ENST00000261646 THYN1Q9P016 225 aa13.52□□□□□ -0.25
SREBF1-201ENST00000261646 ATRXP46100 2492 aa13.52□□□□□ -0.25
SREBF1-201ENST00000261646 SLC25A17O43808 307 aa13.52□□□□□ -0.25
SREBF1-201ENST00000261646 NBEAP1P0C6P0 100 aa13.52□□□□□ -0.25
SREBF1-201ENST00000261646 SRSF9Q13242 221 aaKnown RBP eCLIP13.52□□□□□ -0.254e-8■■■□□ 18.5
SREBF1-201ENST00000261646 NUDT11Q96G61 164 aa13.52□□□□□ -0.25
SREBF1-201ENST00000261646 GNG7O60262 68 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 CCL8P80075 99 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 TMEM144Q7Z5S9 345 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 NAA38Q9BRA0 125 aaKnown RBP13.51□□□□□ -0.25
SREBF1-201ENST00000261646 Q5PR19 223 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 FAM214BQ7L5A3 538 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 WDR31Q8NA23 367 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 IFI27L2Q9H2X8 130 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 C7orf71A4D174 169 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 FOXH1O75593 365 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 CELA3BP08861 270 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 CLDN18P56856 261 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 RSPO1Q2MKA7 263 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-201ENST00000261646 TMEM136Q6ZRR5 245 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 GCSAMQ8N6F7 178 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 SPCS1Q9Y6A9 102 aa13.51□□□□□ -0.25
SREBF1-201ENST00000261646 NCBP2LA6PVI3 153 aaKnown RBP13.5□□□□□ -0.25
SREBF1-201ENST00000261646 NRN1LQ496H8 165 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 PEAR1Q5VY43 1037 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-201ENST00000261646 MRPL14Q6P1L8 145 aaKnown RBP13.5□□□□□ -0.25
SREBF1-201ENST00000261646 BHLHA15Q7RTS1 189 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-201ENST00000261646 PSPNO60542 156 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 PYYP10082 97 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 RPL27AP46776 148 aaKnown RBP13.5□□□□□ -0.25
SREBF1-201ENST00000261646 GNG5P63218 68 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 TWIST1Q15672 202 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 ZNF114Q8NC26 417 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 BPTFQ12830 3046 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 NCOA6Q14686 2063 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-201ENST00000261646 HOXA4Q00056 320 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-201ENST00000261646 SLC25A33Q9BSK2 321 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 CLEC7AQ9BXN2 247 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 COX11Q9Y6N1 276 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 TMEM189A5PLL7 270 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 FOXF2Q12947 444 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 C18orf15Q96N68 181 aa13.5□□□□□ -0.25
SREBF1-201ENST00000261646 hDV102S1A0JD36 115 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 GFRA1P56159 465 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 CX3CL1P78423 397 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 PRSS8Q16651 343 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 Q6ZS49 121 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 PPP1R32Q7Z5V6 425 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 OR9G1Q8NH87 305 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 MGST2Q99735 147 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 PILRBQ9UKJ0 227 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 INSIG2Q9Y5U4 225 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 NTF4P34130 210 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 THADAQ6YHU6 1953 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 PSG1P11464 419 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 DUTP33316 252 aaKnown RBP13.49□□□□□ -0.25
SREBF1-201ENST00000261646 COA6Q5JTJ3 125 aaKnown RBP13.49□□□□□ -0.25
SREBF1-201ENST00000261646 FAM201AQ5SY85 155 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 HAPLN4Q86UW8 402 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 MYOZ3Q8TDC0 251 aa13.49□□□□□ -0.25
SREBF1-201ENST00000261646 MUC21A0A0G2JKD1 596 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 MUC21A0A140T8X8 626 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 A0A1W2PRE2 83 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 FAM181BA6NEQ2 426 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 IGLC2P0DOY2 106 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 IGLC3P0DOY3 106 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 MUC21Q5SSG8 566 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 STPG4Q8N801 248 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 ZNF414Q96IQ9 312 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 RPP21Q9H633 154 aaKnown RBP13.48□□□□□ -0.25
SREBF1-201ENST00000261646 KIAA1671Q9BY89 1806 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 A0A1W2PS18 150 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms