RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 RPRMQ9NS64 109 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 ASF1BQ9NVP2 202 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 DEC1Q9P2X7 70 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 KLF13Q9Y2Y9 288 aaPredicted RBP2.72□□□□□ -1.97
CCDC54-201ENST00000261058 N4BP2Q86UW6 1770 aaPredicted RBP2.72□□□□□ -1.97
CCDC54-201ENST00000261058 DNMT1P26358 1616 aaKnown RBP2.72□□□□□ -1.97
CCDC54-201ENST00000261058 NOTCH2Q04721 2471 aa2.71□□□□□ -1.97
CCDC54-201ENST00000261058 ERVK-7P63135 1459 aa2.71□□□□□ -1.97
CCDC54-201ENST00000261058 MYH4Q9Y623 1939 aa2.71□□□□□ -1.97
CCDC54-201ENST00000261058 IGLV11-55A0A075B6I3 123 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 IGLV3-16A0A075B6K0 115 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 TMED7-TICAM2A0A0A6YYA0 188 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 A0A0D9SG52 128 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 C7orf71A4D174 169 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 C5orf49A4QMS7 147 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 FNDC10F2Z333 226 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 OVOL1O14753 267 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 FFAR1O14842 300 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 CD5LO43866 347 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 DPM2O94777 84 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 SMIM10L2AP0DMW4 78 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 SMIM10L2BP0DMW5 78 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 NUDT2P50583 147 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 NCBP2P52298 156 aaKnown RBP eCLIP2.71□□□□□ -1.98
CCDC54-201ENST00000261058 TAS2R46P59540 309 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 HERVK_113P61574 105 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 AKR1C1Q04828 323 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 MEIG1Q5JSS6 88 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 CLLU1OSQ5K130 101 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 Q6Q795 121 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 ZNF493Q6ZR52 646 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 LINC00173Q6ZV60 143 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 VN1R4Q7Z5H5 301 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 OR2T27Q8NH04 317 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 SLC25A46Q96AG3 418 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 AP1S3Q96PC3 154 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 HIST1H2BLQ99880 126 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 HDHD3Q9BSH5 251 aaPredicted RBP2.71□□□□□ -1.98
CCDC54-201ENST00000261058 VAMP8Q9BV40 100 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 MRPL32Q9BYC8 188 aaKnown RBP2.71□□□□□ -1.98
CCDC54-201ENST00000261058 TCEAL2Q9H3H9 227 aaPredicted RBP2.71□□□□□ -1.98
CCDC54-201ENST00000261058 PARP11Q9NR21 331 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 UQCR10Q9UDW1 63 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 CROCC2H7BZ55 1655 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 ZMYM4Q5VZL5 1548 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 PLEKHH2Q8IVE3 1493 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 PRXQ9BXM0 1461 aa2.71□□□□□ -1.98
CCDC54-201ENST00000261058 PREX2Q70Z35 1606 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 TRPM1Q7Z4N2 1603 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 IGLV4-69A0A075B6H9 119 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 IGKV6D-21A0A0A0MT36 114 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 TRAV8-3A0A0A6YYJ7 113 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 IGHV6-1A0A0B4J1U7 121 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 IGHV2-26A0A0B4J1V2 119 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 TRAV26-2A0A0B4J265 109 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 GGT3PA6NGU5 568 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 CD300LBA8K4G0 201 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 GGTLC3B5MD39 225 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 TMEM250H0YL14 139 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 SLC37A4O43826 429 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 GABARAPO95166 117 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 NCR2O95944 276 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 CXorf1O96002 111 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 TNFP01375 233 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 IGHMP01871 453 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 LINC00032P0C843 101 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 IGLC6P0CF74 106 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 BCL2P10415 239 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 FGF6P10767 208 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 RPS4Y1P22090 263 aaKnown RBP2.7□□□□□ -1.98
CCDC54-201ENST00000261058 NFYBP25208 207 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 SNCAP37840 140 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 CCR2P41597 374 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 ZNF140P52738 457 aaPredicted RBP2.7□□□□□ -1.98
CCDC54-201ENST00000261058 LOXL1Q08397 574 aaPredicted RBP2.7□□□□□ -1.98
CCDC54-201ENST00000261058 IL15RAQ13261 267 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 EBI3Q14213 229 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 LGALSLQ3ZCW2 172 aaPredicted RBP2.7□□□□□ -1.98
CCDC54-201ENST00000261058 C6orf99Q4VX62 202 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 SBSNQ6UWP8 590 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 HRCT1Q6UXD1 115 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 TCF23Q7RTU1 214 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 Q8N976 141 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 LINC00301Q8NCQ3 95 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 OR8B12Q8NGG6 310 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 OR51H1Q8NH63 302 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 OR5AK2Q8NH90 309 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 PKMYT1Q99640 499 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 GNB1LQ9BYB4 327 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 WDR61Q9GZS3 305 aaKnown RBP2.7□□□□□ -1.98
CCDC54-201ENST00000261058 EIF5A2Q9GZV4 153 aaKnown RBP2.7□□□□□ -1.98
CCDC54-201ENST00000261058 TMEM191AQ9H0A3 160 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 FKBP11Q9NYL4 201 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 RNF11Q9Y3C5 154 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 INSIG2Q9Y5U4 225 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 ENPP4Q9Y6X5 453 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 LRRC7Q96NW7 1537 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 PHLPP1O60346 1717 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 DCCP43146 1447 aa2.7□□□□□ -1.98
CCDC54-201ENST00000261058 PRG4Q92954 1404 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms