RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 SMIM6P0DI80 62 aa13.22□□□□□ -0.29
SDCBP-201ENST00000260130 VAMP2P63027 116 aa13.22□□□□□ -0.29
SDCBP-201ENST00000260130 OR2G3Q8NGZ4 309 aa13.22□□□□□ -0.29
SDCBP-201ENST00000260130 NOL4LQ96MY1 436 aaPredicted RBP13.22□□□□□ -0.29
SDCBP-201ENST00000260130 HSPB9Q9BQS6 159 aa13.22□□□□□ -0.29
SDCBP-201ENST00000260130 FBXL15Q9H469 300 aa13.22□□□□□ -0.29
SDCBP-201ENST00000260130 AP4M1O00189 453 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 HLA-DRB1P01911 266 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 CD28P10747 220 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 RAB5AP20339 215 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 LGALS7P47929 136 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 SULT1A1P50225 295 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 EIF4EBP1Q13541 118 aaPredicted RBP13.21□□□□□ -0.29
SDCBP-201ENST00000260130 PSG5Q15238 335 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 TMEM177Q53S58 311 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 SELENOHQ8IZQ5 122 aaKnown RBP13.21□□□□□ -0.29
SDCBP-201ENST00000260130 ZBTB34Q8NCN2 500 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 TCEAL7Q9BRU2 100 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 C20orf24Q9BUV8 137 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 LYRM2Q9NU23 88 aaPredicted RBP13.21□□□□□ -0.29
SDCBP-201ENST00000260130 LINC00527Q9UJ94 153 aa13.21□□□□□ -0.29
SDCBP-201ENST00000260130 IGSF23A1L1A6 192 aa13.21□□□□□ -0.3
SDCBP-201ENST00000260130 RPL30P62888 115 aaKnown RBP13.21□□□□□ -0.3
SDCBP-201ENST00000260130 PLGLAQ15195 96 aa13.21□□□□□ -0.3
SDCBP-201ENST00000260130 SOHLH1Q5JUK2 328 aa13.21□□□□□ -0.3
SDCBP-201ENST00000260130 ZNF66Q6ZN08 573 aa13.21□□□□□ -0.3
SDCBP-201ENST00000260130 METTL1Q9UBP6 276 aaKnown RBP13.21□□□□□ -0.3
SDCBP-201ENST00000260130 ATP6V0CP27449 155 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 POLR2GP62487 172 aaKnown RBP eCLIP13.2□□□□□ -0.3
SDCBP-201ENST00000260130 HIST2H2BDQ6DRA6 164 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 ISOC2Q96AB3 205 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 GNPNAT1Q96EK6 184 aaPredicted RBP13.2□□□□□ -0.3
SDCBP-201ENST00000260130 HARBI1Q96MB7 349 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 PIGBOS1A0A0B4J2F0 54 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 PSMB11A5LHX3 300 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 SSSCA1O60232 199 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 OR13C7P0DN81 318 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 BAXQ07812 192 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 C10orf99Q6UWK7 81 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 ZNF818PQ6ZRF7 136 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 TMEM252Q8N6L7 170 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 TCTEX1D2Q8WW35 142 aa13.2□□□□□ -0.3
SDCBP-201ENST00000260130 IGHV7-81A0A0B4J1V7 117 aa13.19□□□□□ -0.3
SDCBP-201ENST00000260130 RBFOX3A6NFN3 312 aa13.19□□□□□ -0.3
SDCBP-201ENST00000260130 FCN1O00602 326 aa13.19□□□□□ -0.3
SDCBP-201ENST00000260130 TNFSF12O43508 249 aa13.19□□□□□ -0.3
SDCBP-201ENST00000260130 FCGR3BO75015 233 aa13.19□□□□□ -0.3
SDCBP-201ENST00000260130 IGLV2-23P01705 113 aa13.19□□□□□ -0.3
SDCBP-201ENST00000260130 VDAC1P21796 283 aa13.19□□□□□ -0.3
SDCBP-201ENST00000260130 ZNF329Q86UD4 541 aa13.19□□□□□ -0.3
SDCBP-201ENST00000260130 GPHA2Q96T91 129 aa13.19□□□□□ -0.3
SDCBP-201ENST00000260130 SRRM4A7MD48 611 aaKnown RBP13.18□□□□□ -0.3
SDCBP-201ENST00000260130 M0QZ24 198 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 SLC25A17O43808 307 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 IGF1P05019 195 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 UCP1P25874 307 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 CMTM1Q8IZ96 169 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 OR4X2Q8NGF9 303 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 OSR1Q8TAX0 266 aaPredicted RBP13.18□□□□□ -0.3
SDCBP-201ENST00000260130 IL22RA2Q969J5 263 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 CITED2Q99967 270 aaPredicted RBP13.18□□□□□ -0.3
SDCBP-201ENST00000260130 A0A1B0GV50 99 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 S100GP29377 79 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 MAS1LP35410 378 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 SLC35B1P78383 322 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 NMSQ5H8A3 153 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 OR2B11Q5JQS5 317 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 FAM24BQ8N5W8 94 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 OR5C1Q8NGR4 320 aa13.18□□□□□ -0.3
SDCBP-201ENST00000260130 WRBO00258 174 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 RAB2AP61019 212 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 CX3CL1P78423 397 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 ID3Q02535 119 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 TCTEX1D4Q5JR98 221 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 PRR31Q5SQ13 230 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 ZNF580Q9UK33 172 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 H0Y980 276 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 IFNA17P01571 189 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 BRWD1-AS2P59051 145 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 FABP9Q0Z7S8 132 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 CXorf66Q5JRM2 361 aaPredicted RBP13.17□□□□□ -0.3
SDCBP-201ENST00000260130 ZNF562Q6V9R5 426 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 PPP1R27Q86WC6 154 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 OR4S2Q8NH73 311 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 RARRES2Q99969 163 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 MAGT1Q9H0U3 335 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 TPSG1Q9NRR2 321 aa13.17□□□□□ -0.3
SDCBP-201ENST00000260130 PUS1Q9Y606 427 aaKnown RBP eCLIP13.17□□□□□ -0.3
SDCBP-201ENST00000260130 ATP6V0E1O15342 81 aa13.16□□□□□ -0.3
SDCBP-201ENST00000260130 OR2C1O95371 312 aa13.16□□□□□ -0.3
SDCBP-201ENST00000260130 CRYGBP07316 175 aa13.16□□□□□ -0.3
SDCBP-201ENST00000260130 KIR2DS2P43631 304 aa13.16□□□□□ -0.3
SDCBP-201ENST00000260130 CATR1Q13166 79 aa13.16□□□□□ -0.3
SDCBP-201ENST00000260130 SPSB3Q6PJ21 355 aa13.16□□□□□ -0.3
SDCBP-201ENST00000260130 DPPA3Q6W0C5 159 aa13.16□□□□□ -0.3
SDCBP-201ENST00000260130 NDUFA11Q86Y39 141 aa13.16□□□□□ -0.3
SDCBP-201ENST00000260130 C1QL4Q86Z23 238 aa13.16□□□□□ -0.3
SDCBP-201ENST00000260130 CA2P00918 260 aa13.15□□□□□ -0.3
SDCBP-201ENST00000260130 HBE1P02100 147 aa13.15□□□□□ -0.3
SDCBP-201ENST00000260130 UBE2KP61086 200 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms