RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 NUP37Q8NFH4 326 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 HARBI1Q96MB7 349 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 GAL3ST2Q9H3Q3 398 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 ROS1P08922 2347 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 CEP250Q9BV73 2442 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 A0A1W2PRE2 83 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 APOA2P02652 100 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 TNFRSF1AP19438 455 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 TPPP2P59282 170 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 MEF2CQ06413 473 aaPredicted RBP12.38□□□□□ -0.43
DDX56-201ENST00000258772 TIGITQ495A1 244 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 ST6GALNAC3Q8NDV1 305 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 CACNG8Q8WXS5 425 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 GNB1LQ9BYB4 327 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 COMMD5Q9GZQ3 224 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 RNASE7Q9H1E1 156 aaKnown RBP12.38□□□□□ -0.43
DDX56-201ENST00000258772 OSTCQ9NRP0 149 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 TMEM106BQ9NUM4 274 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 TTC28Q96AY4 2481 aa12.38□□□□□ -0.43
DDX56-201ENST00000258772 TRBV9A0A0B4J1U6 114 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 NKX6-3A6NJ46 265 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 H0YJW9 148 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 SERF1AO75920 110 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 RPL8P62917 257 aaKnown RBP12.37□□□□□ -0.43
DDX56-201ENST00000258772 ERHP84090 104 aaKnown RBP12.37□□□□□ -0.43
DDX56-201ENST00000258772 RBMXL3Q8N7X1 1067 aaKnown RBP12.37□□□□□ -0.43
DDX56-201ENST00000258772 OR5AN1Q8NGI8 311 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 CUL9Q8IWT3 2517 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 E7EUB6 86 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 K7EM74 188 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 CRYABP02511 175 aaKnown RBP12.37□□□□□ -0.43
DDX56-201ENST00000258772 CCL3L1P16619 93 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 CD33P20138 364 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 CHRNB4P30926 498 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 CX3CL1P78423 397 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 RELQ04864 619 aaPredicted RBP12.37□□□□□ -0.43
DDX56-201ENST00000258772 Q0VG73 95 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 Q6ZWC4 215 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 ZCCHC24Q8N2G6 241 aaKnown RBP12.37□□□□□ -0.43
DDX56-201ENST00000258772 OR2T6Q8NHC8 308 aa12.37□□□□□ -0.43
DDX56-201ENST00000258772 MAP1BP46821 2468 aaKnown RBP12.37□□□□□ -0.43
DDX56-201ENST00000258772 PSMB11A5LHX3 300 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 ZNF705FA8MVS1 300 aaPredicted RBP12.36□□□□□ -0.43
DDX56-201ENST00000258772 DLL1O00548 723 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 IGLV2-8P01709 118 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 ZNF705DP0CH99 300 aaPredicted RBP12.36□□□□□ -0.43
DDX56-201ENST00000258772 ZNF705BP0CI00 300 aaPredicted RBP12.36□□□□□ -0.43
DDX56-201ENST00000258772 RANP62826 216 aaKnown RBP12.36□□□□□ -0.43
DDX56-201ENST00000258772 TMEM177Q53S58 311 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 TMEM108Q6UXF1 575 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 DMRTC2Q8IXT2 367 aaPredicted RBP12.36□□□□□ -0.43
DDX56-201ENST00000258772 FAM57AQ8TBR7 257 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 FLYWCH2Q96CP2 140 aaKnown RBP12.36□□□□□ -0.43
DDX56-201ENST00000258772 FAM167A-AS1Q96KT0 104 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 ZNF714Q96N38 554 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 TBX15Q96SF7 602 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 LAMA5O15230 3695 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 KIR2DL5BA0A0G2JN68 375 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 KIR2DL5BA0A0G2JPC4 375 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 C17orf100A8MU93 164 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 INS-IGF2F8WCM5 200 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 ISLRO14498 428 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 FCN3O75636 299 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 REG1BP48304 166 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 PPOXP50336 477 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 BAGE3Q86Y29 109 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 BAGE2Q86Y30 109 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 KIR2DL5AQ8N109 375 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 MRPL32Q9BYC8 188 aaKnown RBP12.36□□□□□ -0.43
DDX56-201ENST00000258772 DNAJC4Q9NNZ3 241 aa12.36□□□□□ -0.43
DDX56-201ENST00000258772 ZGRF1Q86YA3 2104 aa12.35□□□□□ -0.43
DDX56-201ENST00000258772 TRAV5A0A0B4J249 113 aa12.35□□□□□ -0.43
DDX56-201ENST00000258772 F2Z2F3 143 aa12.35□□□□□ -0.43
DDX56-201ENST00000258772 USF1P22415 310 aaPredicted RBP12.35□□□□□ -0.43
DDX56-201ENST00000258772 RPL19P84098 196 aaKnown RBP12.35□□□□□ -0.43
DDX56-201ENST00000258772 FXYD3Q14802 87 aa12.35□□□□□ -0.43
DDX56-201ENST00000258772 MORN5Q5VZ52 161 aa12.35□□□□□ -0.43
DDX56-201ENST00000258772 TMEM200BQ69YZ2 307 aa12.35□□□□□ -0.43
DDX56-201ENST00000258772 SLC25A2Q9BXI2 301 aa12.35□□□□□ -0.43
DDX56-201ENST00000258772 SPINK4O60575 86 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 ADIPOQQ15848 244 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 IGF2BP2-AS1Q96M15 143 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 RNF2Q99496 336 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 EREGO14944 169 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 WDR73Q6P4I2 378 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 OR4C13Q8NGP0 309 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 TMEM167AQ8TBQ9 72 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 HSPB9Q9BQS6 159 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 NAV3Q8IVL0 2385 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 PLXNB1O43157 2135 aa12.34□□□□□ -0.43
DDX56-201ENST00000258772 A0A1W2PN81 502 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 DPRXA6NFQ7 191 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 MT-ND6P03923 174 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 SSBP2P81877 361 aaPredicted RBP12.33□□□□□ -0.44
DDX56-201ENST00000258772 WT1-ASQ06250 92 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 DIAPH2-AS1Q14236 149 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 IBA57Q5T440 356 aaKnown RBP12.33□□□□□ -0.44
DDX56-201ENST00000258772 OR5AU1Q8NGC0 362 aa12.33□□□□□ -0.44
DDX56-201ENST00000258772 CBLN4Q9NTU7 201 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms