RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SSUH2Q9Y2M2 353 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 COLCA2A8K830 154 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 IGHV1-8P0DP01 117 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 CD81P60033 236 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 ERHP84090 104 aaKnown RBP7.37□□□□□ -1.23
CKAP2-201ENST00000258607 HTD2P86397 168 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 SLC25A33Q9BSK2 321 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 TMUB1Q9BVT8 246 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 ZNF835Q9Y2P0 537 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 TMSB15BA0A087X1C1 80 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 ZNF320A2RRD8 509 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 ZNF729A6NN14 1252 aaPredicted RBP7.37□□□□□ -1.23
CKAP2-201ENST00000258607 FABP4P15090 132 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 S100A2P29034 98 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 GPR6P46095 362 aaPredicted RBP7.37□□□□□ -1.23
CKAP2-201ENST00000258607 RAB5CP51148 216 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 UBE2L3P68036 154 aaKnown RBP7.37□□□□□ -1.23
CKAP2-201ENST00000258607 WT1-ASQ06250 92 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 RAB31Q13636 194 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 MRPL54Q6P161 138 aaKnown RBP7.37□□□□□ -1.23
CKAP2-201ENST00000258607 TIMD4Q96H15 378 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 SLC35E1Q96K37 410 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 NABP2Q9BQ15 211 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 GGTLC1Q9BX51 225 aa7.37□□□□□ -1.23
CKAP2-201ENST00000258607 LOC102723971A0A1B0GUV8 181 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 C15orf61A6NNL5 157 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 COX7A2P2O60397 106 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 BSXQ3C1V8 233 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 EIF4E3Q8N5X7 224 aaKnown RBP7.36□□□□□ -1.23
CKAP2-201ENST00000258607 ZNF439Q8NDP4 499 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 OR8B3Q8NGG8 313 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 IL22RA2Q969J5 263 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 OR8B2Q96RD0 313 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 GPR61Q9BZJ8 451 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 FUT9Q9Y231 359 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 LINC00312Q9Y6C7 94 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 TRAV8-1A0A0A6YYK1 113 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 IGHV2-26A0A0B4J1V2 119 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 ZNF705GA8MUZ8 300 aaPredicted RBP7.36□□□□□ -1.23
CKAP2-201ENST00000258607 S100A9P06702 114 aaKnown RBP7.36□□□□□ -1.23
CKAP2-201ENST00000258607 PPOXP50336 477 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 TMEM241Q24JQ0 296 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 CDPF1Q6NVV7 123 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 LFNGQ8NES3 379 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 OR5AU1Q8NGC0 362 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 FAM222BQ8WU58 562 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 RAB1BQ9H0U4 201 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 RNASE7Q9H1E1 156 aaKnown RBP7.36□□□□□ -1.23
CKAP2-201ENST00000258607 C11orf1Q9H5F2 150 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 VAX2Q9UIW0 290 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 CTXND1A0A1B0GTU2 59 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 H0YJW9 148 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 HABP2Q14520 560 aaPredicted RBP7.36□□□□□ -1.23
CKAP2-201ENST00000258607 FAM210BQ96KR6 192 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 PRO1933Q9H354 126 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 CHODLQ9H9P2 273 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 NPVFQ9HCQ7 196 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 ELOVL5Q9NYP7 299 aa7.36□□□□□ -1.23
CKAP2-201ENST00000258607 CARHSP1Q9Y2V2 147 aaKnown RBP7.36□□□□□ -1.23
CKAP2-201ENST00000258607 B9A039 149 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 H0Y8G0 127 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 RNF224P0DH78 156 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 ERVFC1-1P60608 527 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 LDLRAD2Q5SZI1 272 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 HEPN1Q6WQI6 88 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 OR10D4PQ8NGN7 298 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 FNDC4Q9H6D8 234 aaPredicted RBP7.35□□□□□ -1.23
CKAP2-201ENST00000258607 YTHDF2Q9Y5A9 579 aaKnown RBP7.35□□□□□ -1.23
CKAP2-201ENST00000258607 DUXBA0A1W2PPF3 345 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 A0A1W2PPI3 338 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 GALR1P47211 349 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 CAMPP49913 170 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 TCTAP57738 103 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 EFNB3Q15768 340 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 FAM90A2PQ658T7 463 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 PQLC2Q6ZP29 291 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 SLC25A48Q6ZT89 311 aaKnown RBP7.35□□□□□ -1.23
CKAP2-201ENST00000258607 TMEM133Q9H2Q1 129 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 ATRQ13535 2644 aa7.35□□□□□ -1.23
CKAP2-201ENST00000258607 NPPCP23582 126 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 ZBTB34Q8NCN2 500 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 OR4C13Q8NGP0 309 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 OR1L8Q8NGR8 309 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 RAB1CQ92928 201 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 IFT22Q9H7X7 185 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 F2RL2O00254 374 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 VMA21Q3ZAQ7 101 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 DEFB104AQ8WTQ1 72 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 WASHC3Q9Y3C0 194 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 UPK2O00526 184 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 OR2J3O76001 311 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 LY86O95711 162 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 RPL27AP46776 148 aaKnown RBP7.34□□□□□ -1.23
CKAP2-201ENST00000258607 RPP30P78346 268 aaKnown RBP7.34□□□□□ -1.23
CKAP2-201ENST00000258607 DHRS7BQ6IAN0 325 aaPredicted RBP7.34□□□□□ -1.23
CKAP2-201ENST00000258607 Q71RC1 249 aaPredicted RBP7.34□□□□□ -1.23
CKAP2-201ENST00000258607 BCL6BQ8N143 479 aaPredicted RBP7.34□□□□□ -1.23
CKAP2-201ENST00000258607 SGMS2Q8NHU3 365 aa7.34□□□□□ -1.23
CKAP2-201ENST00000258607 NEIL1Q96FI4 390 aaPredicted RBP7.34□□□□□ -1.23
CKAP2-201ENST00000258607 FOXA2Q9Y261 457 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms