RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 RPUSD1Q9UJJ7 312 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 ZNF835Q9Y2P0 537 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 OR51B2Q9Y5P1 312 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 SIAH2O43255 324 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 NDUFS7O75251 213 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 NDUFB4O95168 129 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 NPSP0C0P6 89 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 NPPCP23582 126 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 UQCRFS1P47985 274 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 RELBQ01201 579 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 C19orf35Q6ZS72 473 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 TMEM18Q96B42 140 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 NOL4LQ96MY1 436 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 CIB3Q96Q77 187 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 NPCDR1Q9BY65 106 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 GAL3ST2Q9H3Q3 398 aa11.95□□□□□ -0.5
TRAFD1-201ENST00000257604 CDKN1AP38936 164 aa11.94□□□□□ -0.5
TRAFD1-201ENST00000257604 RNASEH2CQ8TDP1 164 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-201ENST00000257604 TMEM170AQ8WVE7 144 aa11.94□□□□□ -0.5
TRAFD1-201ENST00000257604 ACY3Q96HD9 319 aa11.94□□□□□ -0.5
TRAFD1-201ENST00000257604 NEU1Q99519 415 aa11.94□□□□□ -0.5
TRAFD1-201ENST00000257604 ZNF462Q96JM2 2506 aa11.94□□□□□ -0.5
TRAFD1-201ENST00000257604 IGSF10Q6WRI0 2623 aa11.94□□□□□ -0.5
TRAFD1-201ENST00000257604 CA2P00918 260 aa11.94□□□□□ -0.5
TRAFD1-201ENST00000257604 RTL8BQ17RB0 113 aa11.94□□□□□ -0.5
TRAFD1-201ENST00000257604 DLL1O00548 723 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 PAX1P15863 534 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 CA7P43166 264 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 TOMM20LQ6UXN7 152 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 TBX15Q96SF7 602 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 TRAPPC1Q9Y5R8 145 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 SLC25A17O43808 307 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 PYGO2Q9BRQ0 406 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 FKBP11Q9NYL4 201 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 ABCA12Q86UK0 2595 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 C11orf94C9JXX5 98 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 F2Z2F3 143 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 SLC17A3O00476 420 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 GCGP01275 180 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 SAA1P0DJI8 122 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 IL3RAP26951 378 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 LGALS4P56470 323 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 ARF6P62330 175 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 RITA1Q96K30 269 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 COMMD5Q9GZQ3 224 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 PLEKHA3Q9HB20 300 aa11.93□□□□□ -0.5
TRAFD1-201ENST00000257604 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 FAM90A26D6RGX4 464 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 NPY1RP25929 384 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 CNN1P51911 297 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 ADORA2A-AS1P86434 159 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 ACTL10Q5JWF8 245 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 FAM222BQ8WU58 562 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 LINC00312Q9Y6C7 94 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 TLN2Q9Y4G6 2542 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 APOA2P02652 100 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 CGB3P0DN86 165 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 CGB7P0DN87 165 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 CBLN1P23435 193 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 ANKRD39Q53RE8 183 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 HCP5Q6MZN7 132 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 MS4A10Q96PG2 267 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 LPAR2Q9HBW0 351 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 HILPDAQ9Y5L2 63 aa11.92□□□□□ -0.5
TRAFD1-201ENST00000257604 IQCJQ1A5X6 159 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 KIAA1644Q3SXP7 199 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 SLC24A4Q8NFF2 622 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 FAM216AQ8WUB2 273 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 TPSG1Q9NRR2 321 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 POLR3KQ9Y2Y1 108 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 TRAV34A0A0B4J273 112 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 CTXND1A0A1B0GTU2 59 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 P0C879 139 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 JKAMPQ9P055 326 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 NOTCH3Q9UM47 2321 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 E7EUB6 86 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 SGMS2Q8NHU3 365 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 VN1R17PQ8TDU5 208 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 FLYWCH2Q96CP2 140 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 NEIL1Q96FI4 390 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 RAB9BQ9NP90 201 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 GOLT1BQ9Y3E0 138 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 VPS13CQ709C8 3753 aa11.91□□□□□ -0.5
TRAFD1-201ENST00000257604 CNTFRP26992 372 aa11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 LOXP28300 417 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 CDC34P49427 236 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 PLGLAQ15195 96 aa11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 GBGT1Q8N5D6 347 aa11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 UBTD1Q9HAC8 227 aa11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 IGFBP2P18065 325 aa11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 UCNP55089 124 aa11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 HSPE1P61604 102 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 ZNF672Q499Z4 452 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 SPATA31B1PQ5VZV4 182 aa11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 SLC25A48Q6ZT89 311 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 MANBALQ9NQG1 85 aa11.9□□□□□ -0.5
TRAFD1-201ENST00000257604 PMS2P5A8MQ11 134 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 B9A039 149 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 COA6Q5JTJ3 125 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms