RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 IGKV1D-8A0A087WSZ0 117 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 F5H5K5 113 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 FOXH1O75593 365 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 APOA2P02652 100 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 ZNF823P16415 610 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 RPS27P42677 84 aaKnown RBP9.82□□□□□ -0.84
CCNA1-201ENST00000255465 OR3A4PP47883 348 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 TNXAQ16473 311 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 C11orf52Q96A22 123 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.82□□□□□ -0.84
CCNA1-201ENST00000255465 VPREB3Q9UKI3 123 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 OR2W1Q9Y3N9 320 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 SVILO95425 2214 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 CFAP46Q8IYW2 2715 aa9.82□□□□□ -0.84
CCNA1-201ENST00000255465 FASNP49327 2511 aaKnown RBP9.81□□□□□ -0.84
CCNA1-201ENST00000255465 CENPVL3A0A0U1RRI6 287 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 CA1P00915 261 aaPredicted RBP9.81□□□□□ -0.84
CCNA1-201ENST00000255465 SMIM13P0DJ93 91 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 CCL1P22362 96 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 CLDN17P56750 224 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 RPL27P61353 136 aaKnown RBP9.81□□□□□ -0.84
CCNA1-201ENST00000255465 MARCH3Q86UD3 253 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 OCC1Q8TAD7 63 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 ST6GALNAC6Q969X2 333 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 C19orf24Q9BVV8 132 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 LIME1Q9H400 295 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 MTCH1Q9NZJ7 389 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 V9GYV3 84 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 SPENQ96T58 3664 aaKnown RBP9.81□□□□□ -0.84
CCNA1-201ENST00000255465 A0A087WX48 190 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 TRAV17A0A0B4J275 112 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 NAPSAO96009 420 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 SSR4P51571 173 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 OR1C1Q15619 314 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 NRN1LQ496H8 165 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 TSPO2Q5TGU0 170 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 ZFAND6Q6FIF0 208 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 SPINK14Q6IE38 97 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 GATSQ8NAP1 163 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 MDS2Q8NDY4 140 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 OR8B12Q8NGG6 310 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 C16orf52Q8NHV5 167 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 NRGNQ92686 78 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 PIGTQ969N2 578 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 OR4C12Q96R67 309 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 PBOV1Q9GZY1 135 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 KCNS2Q9ULS6 477 aa9.81□□□□□ -0.84
CCNA1-201ENST00000255465 ZGRF1Q86YA3 2104 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 TRGV10A0A0A0MS01 117 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.8□□□□□ -0.84
CCNA1-201ENST00000255465 A0A1W2PRD5 423 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 A0A1W2PRF3 423 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 A0A1W2PRM7 423 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 FAM90A26D6RGX4 464 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 H0Y980 276 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 NEURL1O76050 574 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 IGKV1D-33P01593 117 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 IGKV1-33P01594 117 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 ZNF611Q8N823 705 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 ZNF114Q8NC26 417 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 H1FXQ92522 213 aaKnown RBP9.8□□□□□ -0.84
CCNA1-201ENST00000255465 SLC25A33Q9BSK2 321 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 SLC25A22Q9H936 323 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 TNFRSF19Q9NS68 423 aa9.8□□□□□ -0.84
CCNA1-201ENST00000255465 SNAI2O43623 268 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 SYNGR2O43760 224 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 OR7C1O76099 320 aaPredicted RBP9.79□□□□□ -0.84
CCNA1-201ENST00000255465 ATP5J2P56134 94 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 ZNF766Q5HY98 468 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 ZNF441Q8N8Z8 693 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 NEU4Q8WWR8 484 aaPredicted RBP9.79□□□□□ -0.84
CCNA1-201ENST00000255465 TMEM147Q9BVK8 224 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 MAP1LC3CQ9BXW4 147 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 HES7Q9BYE0 225 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 PSENENQ9NZ42 101 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 LHFPL6Q9Y693 200 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 SETXQ7Z333 2677 aaKnown RBP9.79□□□□□ -0.84
CCNA1-201ENST00000255465 FREM3P0C091 2139 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 NBASA2RRP1 2371 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 ZNF462Q96JM2 2506 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 SMIM27A0A1W2PRY6 76 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 hDV102S1A0JD36 115 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 IZUMO1RA6ND01 250 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 FABP5P3A8MUU1 101 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 IGHV3-7P01780 117 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 SP1P08047 785 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 FXYD4P59646 89 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 TLE1Q04724 770 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 PRR30Q53SZ7 412 aaPredicted RBP9.79□□□□□ -0.84
CCNA1-201ENST00000255465 LINC01545Q5VT33 79 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 ZNF841Q6ZN19 808 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 Q6ZUT4 128 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 ZNF295-AS1Q8N0V1 137 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.79□□□□□ -0.84
CCNA1-201ENST00000255465 GTSF1Q8WW33 167 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 SNRNP40Q96DI7 357 aaKnown RBP9.79□□□□□ -0.84
CCNA1-201ENST00000255465 Q96M66 194 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 CDIP1Q9H305 208 aa9.79□□□□□ -0.84
CCNA1-201ENST00000255465 ZNF331Q9NQX6 463 aaPredicted RBP9.79□□□□□ -0.84
CCNA1-201ENST00000255465 SPANXCQ9NY87 97 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms