RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SLC25A10Q9UBX3 287 aaPredicted RBP11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 KLF12Q9Y4X4 402 aa11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 IFI27L2Q9H2X8 130 aa11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 MS4A5Q9H3V2 200 aa11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 CRIM1Q9NZV1 1036 aa11.13□□□□□ -0.63
PCDHGA3-201ENST00000253812 TMEM229AB2RXF0 380 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 IGFBP2P18065 325 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 IL11P20809 199 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 TMEM52Q8NDY8 209 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 PTGDSP41222 190 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 FBXW9Q5XUX1 488 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 RASL11AQ6T310 242 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 DUSP15Q9H1R2 295 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 MRPL27Q9P0M9 148 aaKnown RBP11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 POLR3KQ9Y2Y1 108 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 NEUROG3Q9Y4Z2 214 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 FOXI3A8MTJ6 420 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 CSRP3P50461 194 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 SLC22A18ASQ8N1D0 253 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 TSKUQ8WUA8 353 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 DDB2Q92466 427 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 ZNF703Q9H7S9 590 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 CALYQ9NYX4 217 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 BDP1A6H8Y1 2624 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 ARID2Q68CP9 1835 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 IGHV3OR15-7A0A075B7D8 119 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 TRAV2A0A0B4J234 112 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 TRAV21A0A0B4J279 112 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 WNT9BO14905 357 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 ID3Q02535 119 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 TMEM30BQ3MIR4 351 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 C9orf40Q8IXQ3 194 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 TMEM101Q96IK0 257 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 TSSC4Q9Y5U2 329 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 HS3ST3B1Q9Y662 390 aa11.12□□□□□ -0.63
PCDHGA3-201ENST00000253812 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 CNTFRP26992 372 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 LHX2P50458 406 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 TRIP6Q15654 476 aaKnown RBP11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 MIR17HGQ75NE6 70 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 CACNG8Q8WXS5 425 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 SPANXDQ9BXN6 97 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 hDV102S1A0JD36 115 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 GGTLC3B5MD39 225 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 TDGF1P13385 188 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 LIFP15018 202 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 MDP1Q86V88 176 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 RNF182Q8N6D2 247 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 EPDR1Q9UM22 224 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 MIA3Q5JRA6 1907 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 IGKV3D-15A0A087WSY6 115 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 IGKV1-8A0A0C4DH67 115 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 M0R381 172 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 IGKV3-15P01624 115 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 LINC01551Q86U37 167 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 C18orf12Q96KH6 178 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 CDKN1BP46527 198 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 SRSF1Q07955 248 aaKnown RBP eCLIP11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 ZXDCQ2QGD7 858 aaPredicted RBP11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 FAM159AQ6UWV7 190 aa11.11□□□□□ -0.63
PCDHGA3-201ENST00000253812 NPIPB13A6NJU9 1138 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 K7EP13 123 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 ADCYAP1P18509 176 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 SLC25A53Q5H9E4 307 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 CLEC2AQ6UVW9 174 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 FBLN5Q9UBX5 448 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 CD33P20138 364 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 RTN4RL2Q86UN3 420 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 JMJD8Q96S16 334 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 WFDC1Q9HC57 220 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 TDRD6O60522 2096 aaKnown RBP11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 MYO16Q9Y6X6 1858 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 C2orf82Q6UX34 121 aa11.1□□□□□ -0.63
PCDHGA3-201ENST00000253812 LINC01549A6NIU2 74 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 SYS1-DBNDD2H3BUS1 97 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 FOXS1O43638 330 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 FOXL2P58012 376 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 ORMDL2Q53FV1 153 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 KLF17Q5JT82 389 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 TMEM144Q7Z5S9 345 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 PSMB11A5LHX3 300 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 C3AR1Q16581 482 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 S100A7L2Q5SY68 101 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 A0A0J9YW62 118 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 LGALS1P09382 135 aaKnown RBP11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 TTC28Q96AY4 2481 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 LOC285556D6RIA3 1793 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 CCL3P10147 92 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 ASIPP42127 132 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 CD300EQ496F6 205 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 TEX45Q8NA69 505 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 PIMREGQ9BSJ6 248 aa11.09□□□□□ -0.63
PCDHGA3-201ENST00000253812 FAM231BA6NCW3 169 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 MLNRO43193 412 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 UCP2P55851 309 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 HIST1H4AP62805 103 aaKnown RBP11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 PRSS53Q2L4Q9 553 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 AGMATQ9BSE5 352 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 PRDM14Q9GZV8 571 aa11.08□□□□□ -0.64
PCDHGA3-201ENST00000253812 IDI2-AS1Q9NZ38 188 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms