RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CTRB1P17538 263 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 ZP3P21754 424 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 GAMTQ14353 236 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 FBLN7Q53RD9 439 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 KLF17Q5JT82 389 aaPredicted RBP11.27□□□□□ -0.61
SDF2-201ENST00000247020 TOR2AQ5JU69 321 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 FAM120AOSQ5T036 256 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 CTRB2Q6GPI1 263 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 ACSM6Q6P461 480 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 BRD3OSQ6XYD6 125 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 ABHD5Q8WTS1 349 aa11.27□□□□□ -0.61
SDF2-201ENST00000247020 RBM14Q96PK6 669 aaKnown RBP11.27□□□□□ -0.61
SDF2-201ENST00000247020 CTXND1A0A1B0GTU2 59 aa11.26□□□□□ -0.61
SDF2-201ENST00000247020 CYB5BO43169 146 aa11.26□□□□□ -0.61
SDF2-201ENST00000247020 CX3CL1P78423 397 aa11.26□□□□□ -0.61
SDF2-201ENST00000247020 SPSB3Q6PJ21 355 aa11.26□□□□□ -0.61
SDF2-201ENST00000247020 C22orf15Q8WYQ4 148 aa11.26□□□□□ -0.61
SDF2-201ENST00000247020 TMEM68Q96MH6 324 aa11.26□□□□□ -0.61
SDF2-201ENST00000247020 PBDC1Q9BVG4 233 aa11.26□□□□□ -0.61
SDF2-201ENST00000247020 SMDT1Q9H4I9 107 aa11.26□□□□□ -0.61
SDF2-201ENST00000247020 MOB4Q9Y3A3 225 aa11.26□□□□□ -0.61
SDF2-201ENST00000247020 NAV3Q8IVL0 2385 aa11.26□□□□□ -0.61
SDF2-201ENST00000247020 ASH1LQ9NR48 2969 aaKnown RBP11.26□□□□□ -0.61
SDF2-201ENST00000247020 SEC14L6B5MCN3 397 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 AVPP01185 164 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 REG1AP05451 166 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 ELLP55199 621 aaPredicted RBP11.25□□□□□ -0.61
SDF2-201ENST00000247020 PMS2P11Q13670 270 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 CYB5R2Q6BCY4 276 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 C16orf82Q7Z2V1 217 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 RPP25LQ8N5L8 163 aaKnown RBP11.25□□□□□ -0.61
SDF2-201ENST00000247020 TTC9CQ8N5M4 171 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 THAP8Q8NA92 274 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 OR10G4Q8NGN3 311 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 OR10G9Q8NGN4 311 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 OR10G7Q8NGN6 311 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 PIFOQ8TCI5 191 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 RCC1LQ96I51 464 aaKnown RBP11.25□□□□□ -0.61
SDF2-201ENST00000247020 FOXC2Q99958 501 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 ACTR3CQ9C0K3 210 aaPredicted RBP11.25□□□□□ -0.61
SDF2-201ENST00000247020 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
SDF2-201ENST00000247020 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 PITPNC1Q9UKF7 332 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 PXMP4Q9Y6I8 212 aa11.25□□□□□ -0.61
SDF2-201ENST00000247020 IGHV3OR16-10A0A075B7F0 116 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 IGHV7-81A0A0B4J1V7 117 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 M0QZK8 103 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 FSHBP01225 129 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 PRR20EP86478 221 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 PRR20CP86479 221 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 PRR20DP86480 221 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 PRR20BP86481 221 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 PRR20AP86496 221 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 HIST2H2BCQ6DN03 193 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 TEX29Q8N6K0 151 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 TMEM116Q8NCL8 245 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 SFT2D1Q8WV19 159 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 SSX3Q99909 188 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 SLC25A33Q9BSK2 321 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 SLC39A9Q9NUM3 307 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 APCP25054 2843 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 CD5P06127 495 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 MFAP2P55001 183 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 B2MP61769 119 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 ZNF726P1Q15940 193 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 KLK9Q2XQG4 91 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 C5orf56Q8N8D9 126 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 C19orf24Q9BVV8 132 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 WNT10AQ9GZT5 417 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 KLK9Q9UKQ9 250 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 SLC45A2Q9UMX9 530 aa11.24□□□□□ -0.61
SDF2-201ENST00000247020 HELZ2Q9BYK8 2649 aaKnown RBP11.23□□□□□ -0.61
SDF2-201ENST00000247020 CENPEQ02224 2701 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 VPS13CQ709C8 3753 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 IGKV1OR2-108A0A075B7D4 117 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 MAP1LC3B2A6NCE7 125 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 DEFA4P12838 97 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 CDC34P49427 236 aaPredicted RBP11.23□□□□□ -0.61
SDF2-201ENST00000247020 SELENOTP62341 195 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 NDPQ00604 133 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 PEA15Q15121 130 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 MIC13Q5XKP0 118 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 STPG3Q8N7X2 389 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 SGMS2Q8NHU3 365 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 NANPQ8TBE9 248 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 MISP3Q96FF7 219 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 MAP1LC3BQ9GZQ8 125 aa11.23□□□□□ -0.61
SDF2-201ENST00000247020 NAV2Q8IVL1 2488 aa11.22□□□□□ -0.61
SDF2-201ENST00000247020 YIF1AO95070 293 aa11.22□□□□□ -0.61
SDF2-201ENST00000247020 GUK1Q16774 197 aa11.22□□□□□ -0.61
SDF2-201ENST00000247020 ASPHD1Q5U4P2 390 aa11.22□□□□□ -0.61
SDF2-201ENST00000247020 MAPK1IP1LQ8NDC0 245 aa11.22□□□□□ -0.61
SDF2-201ENST00000247020 BPIFCQ8NFQ6 507 aa11.22□□□□□ -0.61
SDF2-201ENST00000247020 OR2T6Q8NHC8 308 aa11.22□□□□□ -0.61
SDF2-201ENST00000247020 TRGV9Q99603 122 aa11.22□□□□□ -0.61
SDF2-201ENST00000247020 TCRBV4S1A1TA0A5B7 111 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 TMEM218A2RU14 115 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 A6NDX4 124 aa11.21□□□□□ -0.61
SDF2-201ENST00000247020 I3L2K1 104 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms