RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 BTBD17A6NE02 478 aa13.81□□□□□ -0.2
HOXC6-201ENST00000243108 IFNA10P01566 189 aa13.81□□□□□ -0.2
HOXC6-201ENST00000243108 PRCDQ00LT1 54 aa13.81□□□□□ -0.2
HOXC6-201ENST00000243108 OR4A5Q8NH83 315 aa13.81□□□□□ -0.2
HOXC6-201ENST00000243108 OR5R1Q8NH85 324 aa13.81□□□□□ -0.2
HOXC6-201ENST00000243108 TMEM170AQ8WVE7 144 aa13.81□□□□□ -0.2
HOXC6-201ENST00000243108 GGACTQ9BVM4 153 aa13.81□□□□□ -0.2
HOXC6-201ENST00000243108 C16orf95Q9H693 158 aa13.81□□□□□ -0.2
HOXC6-201ENST00000243108 TMEM231Q9H6L2 316 aa13.81□□□□□ -0.2
HOXC6-201ENST00000243108 A0A1B0GW64 132 aa13.8□□□□□ -0.2
HOXC6-201ENST00000243108 BUB1B-PAK6H3BSN5 160 aa13.8□□□□□ -0.2
HOXC6-201ENST00000243108 RRHO14718 337 aa13.8□□□□□ -0.2
HOXC6-201ENST00000243108 SCO1O75880 301 aa13.8□□□□□ -0.2
HOXC6-201ENST00000243108 TSPAN9O75954 239 aa13.8□□□□□ -0.2
HOXC6-201ENST00000243108 ADCYAP1P18509 176 aa13.8□□□□□ -0.2
HOXC6-201ENST00000243108 RPS16P62249 146 aaKnown RBP13.8□□□□□ -0.2
HOXC6-201ENST00000243108 LY6EQ16553 131 aa13.8□□□□□ -0.2
HOXC6-201ENST00000243108 OR5B3Q8NH48 314 aa13.8□□□□□ -0.2
HOXC6-201ENST00000243108 CARHSP1Q9Y2V2 147 aaKnown RBP13.8□□□□□ -0.2
HOXC6-201ENST00000243108 AMMECR1Q9Y4X0 333 aaPredicted RBP13.8□□□□□ -0.2
HOXC6-201ENST00000243108 TRAV1-1A0A0B4J248 108 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 ODF3BA8MYP8 253 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 IGLV2-23P01705 113 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 APOC3P02656 99 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 H2AFB1P0C5Y9 115 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 MYOD1P15172 320 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 TREML4Q6UXN2 200 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 ETV3LQ6ZN32 361 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 OR4P4Q8NGL7 312 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 VSTM2AQ8TAG5 236 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 TMEM167AQ8TBQ9 72 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 RPRMQ9NS64 109 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 NOTCH1P46531 2555 aa13.79□□□□□ -0.2
HOXC6-201ENST00000243108 TEX50A0A1B0GTY4 177 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 LY6LH3BQJ8 138 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 RAB11AP62491 216 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 GUK1Q16774 197 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 SLC24A4Q8NFF2 622 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 SEC11CQ9BY50 192 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 ENY2Q9NPA8 101 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 SIGLEC9Q9Y336 463 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 C9JQL5 133 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 FGF7P21781 194 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 NPY1RP25929 384 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 DLK1P80370 383 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 TMEM41BQ5BJD5 291 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 OR11H6Q8NGC7 330 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 PLEKHA3Q9HB20 300 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 WDR83OSQ9Y284 106 aa13.78□□□□□ -0.2
HOXC6-201ENST00000243108 INS-IGF2F8WCM5 200 aa13.77□□□□□ -0.21
HOXC6-201ENST00000243108 HBE1P02100 147 aa13.77□□□□□ -0.21
HOXC6-201ENST00000243108 CD1BP29016 333 aa13.77□□□□□ -0.21
HOXC6-201ENST00000243108 LGALS7P47929 136 aa13.77□□□□□ -0.21
HOXC6-201ENST00000243108 ATP5IP56385 69 aaPredicted RBP13.77□□□□□ -0.21
HOXC6-201ENST00000243108 RPL8P62917 257 aaKnown RBP13.77□□□□□ -0.21
HOXC6-201ENST00000243108 PEA15Q15121 130 aa13.77□□□□□ -0.21
HOXC6-201ENST00000243108 MBD3L1Q8WWY6 194 aa13.77□□□□□ -0.21
HOXC6-201ENST00000243108 PBDC1Q9BVG4 233 aa13.77□□□□□ -0.21
HOXC6-201ENST00000243108 NPCDR1Q9BY65 106 aa13.77□□□□□ -0.21
HOXC6-201ENST00000243108 VSIRQ9H7M9 311 aa13.77□□□□□ -0.21
HOXC6-201ENST00000243108 KIAA1456Q9P272 454 aa13.77□□□□□ -0.21
HOXC6-201ENST00000243108 IGHV1-3A0A0C4DH29 117 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 F8W036 122 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 WIPF1O43516 503 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 LGALS4P56470 323 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 CCL20P78556 96 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 BSXQ3C1V8 233 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 NDUFA4L2Q9NRX3 87 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 MPDU1O75352 247 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 CA2P00918 260 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 SFTA3P0C7M3 94 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 ZNF726P1Q15940 193 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 VMA21Q3ZAQ7 101 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 OR1L8Q8NGR8 309 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 SFT2D1Q8WV19 159 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 RCC1LQ96I51 464 aaKnown RBP13.76□□□□□ -0.21
HOXC6-201ENST00000243108 SMDT1Q9H4I9 107 aa13.76□□□□□ -0.21
HOXC6-201ENST00000243108 IFNA4P05014 189 aa13.75□□□□□ -0.21
HOXC6-201ENST00000243108 DEFA5Q01523 94 aa13.75□□□□□ -0.21
HOXC6-201ENST00000243108 SSX2Q16385 188 aa13.75□□□□□ -0.21
HOXC6-201ENST00000243108 ACSM6Q6P461 480 aa13.75□□□□□ -0.21
HOXC6-201ENST00000243108 ATRAIDQ6UW56 229 aa13.75□□□□□ -0.21
HOXC6-201ENST00000243108 SVBPQ8N300 66 aa13.75□□□□□ -0.21
HOXC6-201ENST00000243108 HINT2Q9BX68 163 aa13.75□□□□□ -0.21
HOXC6-201ENST00000243108 COMMD5Q9GZQ3 224 aa13.75□□□□□ -0.21
HOXC6-201ENST00000243108 FNDC10F2Z333 226 aa13.74□□□□□ -0.21
HOXC6-201ENST00000243108 MBP02144 154 aa13.74□□□□□ -0.21
HOXC6-201ENST00000243108 RAB2AP61019 212 aa13.74□□□□□ -0.21
HOXC6-201ENST00000243108 MRGPRG-AS1Q2M3A8 158 aa13.74□□□□□ -0.21
HOXC6-201ENST00000243108 C2orf83Q53S99 150 aa13.74□□□□□ -0.21
HOXC6-201ENST00000243108 ZNF709Q8N972 641 aa13.74□□□□□ -0.21
HOXC6-201ENST00000243108 TEX45Q8NA69 505 aa13.74□□□□□ -0.21
HOXC6-201ENST00000243108 RPEQ96AT9 228 aa13.74□□□□□ -0.21
HOXC6-201ENST00000243108 RITA1Q96K30 269 aa13.74□□□□□ -0.21
HOXC6-201ENST00000243108 EIF5A2Q9GZV4 153 aaKnown RBP13.74□□□□□ -0.21
HOXC6-201ENST00000243108 ZNF430Q9H8G1 570 aaPredicted RBP13.74□□□□□ -0.21
HOXC6-201ENST00000243108 TBL2Q9Y4P3 447 aaKnown RBP13.74□□□□□ -0.21
HOXC6-201ENST00000243108 IGHV3-72A0A0B4J1Y9 119 aa13.73□□□□□ -0.21
HOXC6-201ENST00000243108 A0A1B0GV50 99 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 382.2 ms