RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 MLANAQ16655 118 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 VMA21Q3ZAQ7 101 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 ADGRG4Q8IZF6 3080 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 MUC15Q8N387 334 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 ZNF114Q8NC26 417 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 FAM122AQ96E09 287 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 UHRF2Q96PU4 802 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 ZNF430Q9H8G1 570 aaPredicted RBP13.06□□□□□ -0.32
UBE3D-201ENST00000237186 NIT2Q9NQR4 276 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 PITPNC1Q9UKF7 332 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 TNCP24821 2201 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 NCOR2Q9Y618 2525 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 IGLV1-47P01700 117 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 RBP4P02753 201 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 SOD3P08294 240 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 S100A2P29034 98 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 SUB1P53999 127 aaKnown RBP eCLIP13.06□□□□□ -0.32
UBE3D-201ENST00000237186 MRGPRG-AS1Q2M3A8 158 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 PVRIGQ6DKI7 326 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 SFRP2Q96HF1 295 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 YLPM1P49750 1951 aaKnown RBP13.05□□□□□ -0.32
UBE3D-201ENST00000237186 A0A1W2PPQ1 181 aa13.05□□□□□ -0.32
UBE3D-201ENST00000237186 PSMB11A5LHX3 300 aa13.05□□□□□ -0.32
UBE3D-201ENST00000237186 SIAH2O43255 324 aa13.05□□□□□ -0.32
UBE3D-201ENST00000237186 IGHV2-70P01814 119 aa13.05□□□□□ -0.32
UBE3D-201ENST00000237186 COL8A2P25067 703 aa13.05□□□□□ -0.32
UBE3D-201ENST00000237186 TAS2R45P59539 299 aa13.05□□□□□ -0.32
UBE3D-201ENST00000237186 SSX2Q16385 188 aa13.05□□□□□ -0.32
UBE3D-201ENST00000237186 ZNF672Q499Z4 452 aaPredicted RBP13.05□□□□□ -0.32
UBE3D-201ENST00000237186 COA6Q5JTJ3 125 aaKnown RBP13.05□□□□□ -0.32
UBE3D-201ENST00000237186 TEX45Q8NA69 505 aa13.05□□□□□ -0.32
UBE3D-201ENST00000237186 ZNF503Q96F45 646 aa13.05□□□□□ -0.32
UBE3D-201ENST00000237186 RNF2Q99496 336 aa13.05□□□□□ -0.32
UBE3D-201ENST00000237186 MRPL32Q9BYC8 188 aaKnown RBP13.05□□□□□ -0.32
UBE3D-201ENST00000237186 OR51M1Q9H341 326 aa13.05□□□□□ -0.32
UBE3D-201ENST00000237186 ACTL6BO94805 426 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 PRRX1P54821 245 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 UNQ6494/PRO21346Q6UXR6 183 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 BEND2Q8NDZ0 799 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 OCC1Q8TAD7 63 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 C8orf46Q8TAG6 207 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 SLC25A33Q9BSK2 321 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 PKDREJQ9NTG1 2253 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 SPTA1P02549 2419 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 IGHV2-26A0A0B4J1V2 119 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 CRYGBP07316 175 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 C8orf88P0DMB2 117 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 GATA2P23769 480 aaPredicted RBP13.04□□□□□ -0.32
UBE3D-201ENST00000237186 PSG5Q15238 335 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 ACTL10Q5JWF8 245 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 GFI1BQ5VTD9 330 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 THAP8Q8NA92 274 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 OR2T6Q8NHC8 308 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 TMEM37Q8WXS4 190 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 RITA1Q96K30 269 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 GPR61Q9BZJ8 451 aa13.04□□□□□ -0.32
UBE3D-201ENST00000237186 FNDC4Q9H6D8 234 aaPredicted RBP13.04□□□□□ -0.32
UBE3D-201ENST00000237186 FAM90A27PA6NNH2 459 aa13.03□□□□□ -0.32
UBE3D-201ENST00000237186 CCL21O00585 134 aa13.03□□□□□ -0.32
UBE3D-201ENST00000237186 SLC25A17O43808 307 aa13.03□□□□□ -0.32
UBE3D-201ENST00000237186 TEX38Q6PEX7 206 aa13.03□□□□□ -0.32
UBE3D-201ENST00000237186 OR5T1Q8NG75 326 aa13.03□□□□□ -0.32
UBE3D-201ENST00000237186 GSN-AS1Q9NRJ2 163 aa13.03□□□□□ -0.32
UBE3D-201ENST00000237186 ARFGEF3Q5TH69 2177 aa13.03□□□□□ -0.32
UBE3D-201ENST00000237186 MDFIC2A0A1B0GVS7 189 aa13.02□□□□□ -0.32
UBE3D-201ENST00000237186 PGPEP1LA6NFU8 196 aa13.02□□□□□ -0.32
UBE3D-201ENST00000237186 PYY3Q5JQD4 70 aa13.02□□□□□ -0.32
UBE3D-201ENST00000237186 C10orf55Q5SWW7 151 aa13.02□□□□□ -0.32
UBE3D-201ENST00000237186 MMD2Q8IY49 270 aa13.02□□□□□ -0.32
UBE3D-201ENST00000237186 ACY3Q96HD9 319 aa13.02□□□□□ -0.32
UBE3D-201ENST00000237186 DNAJC4Q9NNZ3 241 aa13.02□□□□□ -0.32
UBE3D-201ENST00000237186 AURKAIP1Q9NWT8 199 aaPredicted RBP13.02□□□□□ -0.32
UBE3D-201ENST00000237186 CHD8Q9HCK8 2581 aa13.02□□□□□ -0.33
UBE3D-201ENST00000237186 A0A1W2PPI3 338 aa13.02□□□□□ -0.33
UBE3D-201ENST00000237186 A0A1W2PRE2 83 aa13.02□□□□□ -0.33
UBE3D-201ENST00000237186 LYNX1G3V0Z9 82 aa13.02□□□□□ -0.33
UBE3D-201ENST00000237186 BUB1B-PAK6H3BSN5 160 aa13.02□□□□□ -0.33
UBE3D-201ENST00000237186 FABP1P07148 127 aa13.02□□□□□ -0.33
UBE3D-201ENST00000237186 LYNX1P0DP58 116 aa13.02□□□□□ -0.33
UBE3D-201ENST00000237186 GRNP28799 593 aaKnown RBP13.02□□□□□ -0.33
UBE3D-201ENST00000237186 SELENOTP62341 195 aa13.02□□□□□ -0.33
UBE3D-201ENST00000237186 MRPL41Q8IXM3 137 aaKnown RBP13.02□□□□□ -0.33
UBE3D-201ENST00000237186 FAM167A-AS1Q96KT0 104 aa13.02□□□□□ -0.33
UBE3D-201ENST00000237186 CRYGCP07315 174 aa13.01□□□□□ -0.33
UBE3D-201ENST00000237186 PDLIM4P50479 330 aa13.01□□□□□ -0.33
UBE3D-201ENST00000237186 ADORA2A-AS1P86434 159 aa13.01□□□□□ -0.33
UBE3D-201ENST00000237186 PRSS8Q16651 343 aa13.01□□□□□ -0.33
UBE3D-201ENST00000237186 DNLZQ5SXM8 178 aa13.01□□□□□ -0.33
UBE3D-201ENST00000237186 TMEM183AQ8IXX5 376 aa13.01□□□□□ -0.33
UBE3D-201ENST00000237186 OR10G8Q8NGN5 311 aa13.01□□□□□ -0.33
UBE3D-201ENST00000237186 EAF1Q96JC9 268 aaPredicted RBP13.01□□□□□ -0.33
UBE3D-201ENST00000237186 CLEC7AQ9BXN2 247 aa13.01□□□□□ -0.33
UBE3D-201ENST00000237186 IGKV1D-37A0A075B6S9 117 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 TRAV9-1A0A075B6T8 112 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 PPIAL4CA0A0B4J2A2 164 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 TCRBV4S1A1TA0A5B7 111 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 IGLC7A0M8Q6 106 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 PPIAL4GP0DN37 164 aa13□□□□□ -0.33
UBE3D-201ENST00000237186 CLEC12BQ2HXU8 276 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms