RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 CLDN16Q9Y5I7 305 aa6.43□□□□□ -1.38
PRDM2-201ENST00000235372 IGHV3-48P01763 117 aa6.43□□□□□ -1.38
PRDM2-201ENST00000235372 FAM27BQ5VT28 67 aa6.43□□□□□ -1.38
PRDM2-201ENST00000235372 ASCL2Q99929 193 aa6.43□□□□□ -1.38
PRDM2-201ENST00000235372 COL22A1Q8NFW1 1626 aaPredicted RBP6.43□□□□□ -1.38
PRDM2-201ENST00000235372 DSCAML1Q8TD84 2053 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 TMEM155Q4W5P6 130 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 RSPO4Q2I0M5 234 aaPredicted RBP6.42□□□□□ -1.38
PRDM2-201ENST00000235372 SNHG12Q9BXW3 62 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 PKIBQ9C010 78 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 TM4SF5O14894 197 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 GCM2O75603 506 aaPredicted RBP6.42□□□□□ -1.38
PRDM2-201ENST00000235372 UPK3AO75631 287 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 TBR1Q16650 682 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 TMEM174Q8WUU8 243 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 TNFRSF14Q92956 283 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 ZNF385AQ96PM9 386 aaKnown RBP6.42□□□□□ -1.38
PRDM2-201ENST00000235372 PTPRBP23467 1997 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 PGLYRP1O75594 196 aaPredicted RBP6.42□□□□□ -1.38
PRDM2-201ENST00000235372 MAJINQ3KP22 176 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 ZNF585BQ52M93 769 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 NDUFS5O43920 106 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 NBEAP1P0C6P0 100 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 CIARTQ8N365 385 aaPredicted RBP6.42□□□□□ -1.38
PRDM2-201ENST00000235372 LINC01555Q8NAE3 123 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 GPR146Q96CH1 333 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 FOXJ2Q9P0K8 574 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 CHTOPQ9Y3Y2 248 aaKnown RBP6.42□□□□□ -1.38
PRDM2-201ENST00000235372 DMKNQ6E0U4 476 aaPredicted RBP6.42□□□□□ -1.38
PRDM2-201ENST00000235372 KLF14Q8TD94 323 aaPredicted RBP6.42□□□□□ -1.38
PRDM2-201ENST00000235372 VKORC1Q9BQB6 163 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 TRAF4Q9BUZ4 470 aaPredicted RBP6.42□□□□□ -1.38
PRDM2-201ENST00000235372 FAM60AQ9NP50 221 aa6.42□□□□□ -1.38
PRDM2-201ENST00000235372 IGKV1D-42A0A075B6H8 117 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 IL11P20809 199 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 COL9A1P20849 921 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 TRAV14DV4A0A0A6YYC5 116 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 PATE3B3GLJ2 98 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 LEPROTO15243 131 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 NPC2P61916 151 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 COQ2Q96H96 371 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 S4R3C0 116 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 PCNX3Q9H6A9 2034 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A10PA6NDY2 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A18PA6NE21 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A16PA6NEW6 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A20PA6NIJ5 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A8PA6NJQ4 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A7PA6NKC0 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A22PA8MWA6 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A12PA8MX19 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A5PA8MXJ8 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A23PA8MXZ1 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 EFEMP2O95967 443 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 IGHV3-11P01762 117 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A15PP0C7V4 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A13PP0C7W8 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A14PP0C7W9 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 FAM90A24PP0C7X0 464 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 MS4A3Q96HJ5 214 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 COL24A1Q17RW2 1714 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 CLPSL1A2RUU4 121 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 A8MWV9 139 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 SS18Q15532 418 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 SRSF7Q16629 238 aaKnown RBP eCLIP6.41□□□□□ -1.38
PRDM2-201ENST00000235372 ORMDL2Q53FV1 153 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 LHFPL4Q7Z7J7 247 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 GATAD1Q8WUU5 269 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 DPM2O94777 84 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 VSIG8P0DPA2 414 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 SAXO1Q8IYX7 474 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 RPP25Q9BUL9 199 aaKnown RBP6.41□□□□□ -1.38
PRDM2-201ENST00000235372 ERG28Q9UKR5 140 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 TCF19Q9Y242 345 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 ZG16O60844 167 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 GCHFRP30047 84 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 DMRTA1Q5VZB9 504 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 ZFAND6Q6FIF0 208 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 C5orf30Q96GV9 206 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 RPP21Q9H633 154 aaKnown RBP6.41□□□□□ -1.38
PRDM2-201ENST00000235372 KLK13Q9UKR3 277 aa6.41□□□□□ -1.38
PRDM2-201ENST00000235372 TMEM238C9JI98 176 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 CRYGNQ8WXF5 182 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 YBX2Q9Y2T7 364 aaKnown RBP6.4□□□□□ -1.38
PRDM2-201ENST00000235372 GRIFINA4D1Z8 144 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 C6orf226Q5I0X4 101 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 ABHD17AQ96GS6 310 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 SLC50A1Q9BRV3 221 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 MALRD1Q5VYJ5 2156 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 IGHV3-64A0A075B6Q5 118 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 DUTP33316 252 aaKnown RBP6.4□□□□□ -1.38
PRDM2-201ENST00000235372 CTAG1AP78358 180 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 NKAPP1Q8N9T2 125 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 FBXL15Q9H469 300 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 OTOGLQ3ZCN5 2332 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 CDC42EP2O14613 210 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 ZP4Q12836 540 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 ZNRF1Q8ND25 227 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 HMGCLL1Q8TB92 370 aa6.4□□□□□ -1.38
PRDM2-201ENST00000235372 OR5P3Q8WZ94 311 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms