RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
ITGA4-201ENST00000233573 PLXNB1O43157 2135 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 CRYBA1P05813 215 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 FOLR2P14207 255 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 ZFP36P26651 326 aaKnown RBP12.79□□□□□ -0.36
ITGA4-201ENST00000233573 C1orf122Q6ZSJ8 110 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 SLC16A13Q7RTY0 426 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 RNASEH2CQ8TDP1 164 aaKnown RBP12.79□□□□□ -0.36
ITGA4-201ENST00000233573 RNF5Q99942 180 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 BPESC1Q9GZL8 116 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 FNDC4Q9H6D8 234 aaPredicted RBP12.79□□□□□ -0.36
ITGA4-201ENST00000233573 SDF2L1Q9HCN8 221 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 SEPSECSQ9HD40 501 aaKnown RBP12.79□□□□□ -0.36
ITGA4-201ENST00000233573 GOSR1O95249 250 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 ARL14EPLP0DKL9 152 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 HTR1DP28221 377 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 MAS1LP35410 378 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 SSBP2P81877 361 aaPredicted RBP12.79□□□□□ -0.36
ITGA4-201ENST00000233573 HABP2Q14520 560 aaPredicted RBP12.79□□□□□ -0.36
ITGA4-201ENST00000233573 KIR3DL3Q8N743 410 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 DPM3Q9P2X0 92 aa12.79□□□□□ -0.36
ITGA4-201ENST00000233573 NAV3Q8IVL0 2385 aa12.78□□□□□ -0.36
ITGA4-201ENST00000233573 MAP1AP78559 2803 aaPredicted RBP12.78□□□□□ -0.36
ITGA4-201ENST00000233573 IGHV2-5P01817 119 aa12.78□□□□□ -0.36
ITGA4-201ENST00000233573 COL8A1P27658 744 aa12.78□□□□□ -0.36
ITGA4-201ENST00000233573 COMPP49747 757 aaPredicted RBP12.78□□□□□ -0.36
ITGA4-201ENST00000233573 PAX2Q02962 417 aa12.78□□□□□ -0.36
ITGA4-201ENST00000233573 PNRC1Q12796 327 aaPredicted RBP12.78□□□□□ -0.36
ITGA4-201ENST00000233573 KLRD1Q13241 179 aa12.78□□□□□ -0.36
ITGA4-201ENST00000233573 SPATA31B1PQ5VZV4 182 aa12.78□□□□□ -0.36
ITGA4-201ENST00000233573 SPNS3Q6ZMD2 512 aa12.78□□□□□ -0.36
ITGA4-201ENST00000233573 ZNF114Q8NC26 417 aa12.78□□□□□ -0.36
ITGA4-201ENST00000233573 CFHR4Q92496 578 aa12.78□□□□□ -0.36
ITGA4-201ENST00000233573 USP9YO00507 2555 aaPredicted RBP12.78□□□□□ -0.36
ITGA4-201ENST00000233573 B4DEV8 164 aa12.77□□□□□ -0.36
ITGA4-201ENST00000233573 TIMM23O14925 209 aa12.77□□□□□ -0.36
ITGA4-201ENST00000233573 VENTXO95231 258 aa12.77□□□□□ -0.36
ITGA4-201ENST00000233573 CXorf1O96002 111 aa12.77□□□□□ -0.36
ITGA4-201ENST00000233573 MT-ND4LP03901 98 aa12.77□□□□□ -0.36
ITGA4-201ENST00000233573 COX6B1P14854 86 aa12.77□□□□□ -0.36
ITGA4-201ENST00000233573 OR10J1P30954 320 aa12.77□□□□□ -0.36
ITGA4-201ENST00000233573 PPP1R27Q86WC6 154 aa12.77□□□□□ -0.36
ITGA4-201ENST00000233573 OR4F5Q8NH21 305 aa12.77□□□□□ -0.36
ITGA4-201ENST00000233573 OR2T6Q8NHC8 308 aa12.77□□□□□ -0.36
ITGA4-201ENST00000233573 OR4F4Q96R69 305 aa12.77□□□□□ -0.36
ITGA4-201ENST00000233573 METTL1Q9UBP6 276 aaKnown RBP12.77□□□□□ -0.36
ITGA4-201ENST00000233573 ZNF727A8MUV8 499 aa12.77□□□□□ -0.37
ITGA4-201ENST00000233573 RPL27AP46776 148 aaKnown RBP12.77□□□□□ -0.37
ITGA4-201ENST00000233573 SUB1P53999 127 aaKnown RBP eCLIP12.77□□□□□ -0.37
ITGA4-201ENST00000233573 RHOBP62745 196 aa12.77□□□□□ -0.37
ITGA4-201ENST00000233573 FLI1Q01543 452 aaPredicted RBP12.77□□□□□ -0.37
ITGA4-201ENST00000233573 TNXAQ16473 311 aa12.77□□□□□ -0.37
ITGA4-201ENST00000233573 CYP2G1PQ6ZSU1 146 aa12.77□□□□□ -0.37
ITGA4-201ENST00000233573 SLC35E1Q96K37 410 aa12.77□□□□□ -0.37
ITGA4-201ENST00000233573 NBPF19A0A087WUL8 3843 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 C11orf94C9JXX5 98 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 OR2C1O95371 312 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 NPPCP23582 126 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 MFAP2P55001 183 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 RNF212Q495C1 297 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 LHFPL4Q7Z7J7 247 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 FBXL15Q9H469 300 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 TEX22C9J3V5 150 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 REG1AP05451 166 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 CRYGCP07315 174 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 AREGP15514 252 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 FAM24BQ8N5W8 94 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 SMIM7Q9BQ49 75 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 SIRPDQ9H106 197 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 PARLQ9H300 379 aa12.76□□□□□ -0.37
ITGA4-201ENST00000233573 MRPL36Q9P0J6 103 aaKnown RBP12.76□□□□□ -0.37
ITGA4-201ENST00000233573 PSMB11A5LHX3 300 aa12.75□□□□□ -0.37
ITGA4-201ENST00000233573 GATA2P23769 480 aaPredicted RBP12.75□□□□□ -0.37
ITGA4-201ENST00000233573 GCHFRP30047 84 aa12.75□□□□□ -0.37
ITGA4-201ENST00000233573 ATP5G3P48201 142 aa12.75□□□□□ -0.37
ITGA4-201ENST00000233573 LCN2P80188 198 aa12.75□□□□□ -0.37
ITGA4-201ENST00000233573 VMO1Q7Z5L0 202 aa12.75□□□□□ -0.37
ITGA4-201ENST00000233573 MLXQ9UH92 298 aa12.75□□□□□ -0.37
ITGA4-201ENST00000233573 NAT8Q9UHE5 227 aa12.75□□□□□ -0.37
ITGA4-201ENST00000233573 POLQO75417 2590 aa12.75□□□□□ -0.37
ITGA4-201ENST00000233573 IGKV1D-37A0A075B6S9 117 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 CXorf65A6NEN9 183 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 FCN1O00602 326 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 CEACAM3P40198 252 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 LMO4P61968 165 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 MIR17HGQ75NE6 70 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 THAP8Q8NA92 274 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 RPUSD4Q96CM3 377 aaKnown RBP12.74□□□□□ -0.37
ITGA4-201ENST00000233573 FUT9Q9Y231 359 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 HILPDAQ9Y5L2 63 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 WNK2Q9Y3S1 2297 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 FOXH1O75593 365 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 ACTL6BO94805 426 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 OR5G3P0C626 314 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 HOXB4P17483 251 aaPredicted RBP12.74□□□□□ -0.37
ITGA4-201ENST00000233573 RAB5AP20339 215 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 UBE2G2P60604 165 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 TMEM241Q24JQ0 296 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 FAM78BQ5VT40 261 aa12.74□□□□□ -0.37
ITGA4-201ENST00000233573 MRPL41Q8IXM3 137 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms