RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 SMDT1Q9H4I9 107 aa18.89■□□□□ 0.62
RRP9-201ENST00000232888 TGFAP01135 160 aa18.89■□□□□ 0.61
RRP9-201ENST00000232888 REG1AP05451 166 aa18.89■□□□□ 0.61
RRP9-201ENST00000232888 CD5P06127 495 aa18.89■□□□□ 0.61
RRP9-201ENST00000232888 CRYGCP07315 174 aa18.89■□□□□ 0.61
RRP9-201ENST00000232888 RPP25LQ8N5L8 163 aaKnown RBP18.89■□□□□ 0.61
RRP9-201ENST00000232888 BPIFCQ8NFQ6 507 aa18.89■□□□□ 0.61
RRP9-201ENST00000232888 ARPC1AQ92747 370 aa18.89■□□□□ 0.61
RRP9-201ENST00000232888 PXMP4Q9Y6I8 212 aa18.89■□□□□ 0.61
RRP9-201ENST00000232888 CRYBG3Q68DQ2 2970 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 ANKRD17O75179 2603 aaKnown RBP18.88■□□□□ 0.61
RRP9-201ENST00000232888 IGHV3OR16-10A0A075B7F0 116 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 A0A0U1RQK1 487 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 CTXND1A0A1B0GTU2 59 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 FBP1P09467 338 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 IGHV4-31P0DP07 118 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 CTRB1P17538 263 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 PEA15Q15121 130 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 TMEM249Q2WGJ8 235 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 CTRB2Q6GPI1 263 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 BRD3OSQ6XYD6 125 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 KRTAP1-3Q8IUG1 177 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 Q96MF0 132 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 SLC39A9Q9NUM3 307 aa18.88■□□□□ 0.61
RRP9-201ENST00000232888 KLF17Q5JT82 389 aaPredicted RBP18.87■□□□□ 0.61
RRP9-201ENST00000232888 C22orf15Q8WYQ4 148 aa18.87■□□□□ 0.61
RRP9-201ENST00000232888 FNDC4Q9H6D8 234 aaPredicted RBP18.87■□□□□ 0.61
RRP9-201ENST00000232888 TMEM218A2RU14 115 aa18.86■□□□□ 0.61
RRP9-201ENST00000232888 NPIPB5A8MRT5 1133 aa18.86■□□□□ 0.61
RRP9-201ENST00000232888 SEC14L6B5MCN3 397 aa18.86■□□□□ 0.61
RRP9-201ENST00000232888 PMS2P11Q13670 270 aa18.86■□□□□ 0.61
RRP9-201ENST00000232888 ZNF726P1Q15940 193 aa18.86■□□□□ 0.61
RRP9-201ENST00000232888 GUK1Q16774 197 aa18.86■□□□□ 0.61
RRP9-201ENST00000232888 RBM14Q96PK6 669 aaKnown RBP18.86■□□□□ 0.61
RRP9-201ENST00000232888 TREM1Q9NP99 234 aa18.86■□□□□ 0.61
RRP9-201ENST00000232888 SLC45A2Q9UMX9 530 aa18.86■□□□□ 0.61
RRP9-201ENST00000232888 AVPP01185 164 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 MFAP2P55001 183 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 B2MP61769 119 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 PRR20EP86478 221 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 PRR20CP86479 221 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 PRR20DP86480 221 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 PRR20BP86481 221 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 PRR20AP86496 221 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 MLANAQ16655 118 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 TENM4Q6N022 2769 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 THAP8Q8NA92 274 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 MISP3Q96FF7 219 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 LINC00052Q96N35 136 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 WNT10AQ9GZT5 417 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 DOPEY2Q9Y3R5 2298 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 MAP1LC3B2A6NCE7 125 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 MIC13Q5XKP0 118 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 TTC9CQ8N5M4 171 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 STPG3Q8N7X2 389 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 PIFOQ8TCI5 191 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 NARS2Q96I59 477 aaKnown RBP18.85■□□□□ 0.61
RRP9-201ENST00000232888 SCRT1Q9BWW7 348 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 MAP1LC3BQ9GZQ8 125 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 MOB4Q9Y3A3 225 aa18.85■□□□□ 0.61
RRP9-201ENST00000232888 IGHV7-81A0A0B4J1V7 117 aa18.84■□□□□ 0.61
RRP9-201ENST00000232888 YIF1AO95070 293 aa18.84■□□□□ 0.61
RRP9-201ENST00000232888 DEFA4P12838 97 aa18.84■□□□□ 0.61
RRP9-201ENST00000232888 HIST2H2BCQ6DN03 193 aa18.84■□□□□ 0.61
RRP9-201ENST00000232888 TMEM116Q8NCL8 245 aa18.84■□□□□ 0.61
RRP9-201ENST00000232888 OR2T6Q8NHC8 308 aa18.84■□□□□ 0.61
RRP9-201ENST00000232888 ACY3Q96HD9 319 aa18.84■□□□□ 0.61
RRP9-201ENST00000232888 C19orf24Q9BVV8 132 aa18.84■□□□□ 0.61
RRP9-201ENST00000232888 IGKV1OR2-108A0A075B7D4 117 aa18.83■□□□□ 0.6
RRP9-201ENST00000232888 CCL20P78556 96 aa18.83■□□□□ 0.6
RRP9-201ENST00000232888 SRSF3P84103 164 aaKnown RBP18.83■□□□□ 0.6
RRP9-201ENST00000232888 LCN15Q6UWW0 184 aa18.83■□□□□ 0.6
RRP9-201ENST00000232888 TMEM68Q96MH6 324 aa18.83■□□□□ 0.6
RRP9-201ENST00000232888 SSX3Q99909 188 aa18.83■□□□□ 0.6
RRP9-201ENST00000232888 EIF5A2Q9GZV4 153 aaKnown RBP18.83■□□□□ 0.6
RRP9-201ENST00000232888 NAV2Q8IVL1 2488 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 RBFOX3A6NFN3 312 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 LINC00869P0C866 280 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 APELAP0DMC3 54 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 OR10J1P30954 320 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 CDC34P49427 236 aaPredicted RBP18.82■□□□□ 0.6
RRP9-201ENST00000232888 SELENOTP62341 195 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 CYB5R2Q6BCY4 276 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 FAM122CQ6P4D5 195 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 C5orf56Q8N8D9 126 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 NPIPB3Q92617 1050 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 RAB24Q969Q5 203 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 SLC25A33Q9BSK2 321 aa18.82■□□□□ 0.6
RRP9-201ENST00000232888 A0A1W2PPV4 95 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 CYP2G1PQ6ZSU1 146 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 PITPNC1Q9UKF7 332 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.81■□□□□ 0.61e-6■■■■□ 24.3
RRP9-201ENST00000232888 CELSR2Q9HCU4 2923 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 ASH1LQ9NR48 2969 aaKnown RBP18.81■□□□□ 0.6
RRP9-201ENST00000232888 PLXNB1O43157 2135 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 A0A1B0GV50 99 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 MT-CO2P00403 227 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 NDPQ00604 133 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 SSX7Q7RTT5 188 aa18.81■□□□□ 0.6
RRP9-201ENST00000232888 MAPK1IP1LQ8NDC0 245 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms