RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 TIGITQ495A1 244 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 OR10J3Q5JRS4 329 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 TMEM164Q5U3C3 297 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 DHRS13Q6UX07 377 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 LOXL4Q96JB6 756 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 OR2V2Q96R30 315 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 ENY2Q9NPA8 101 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 OSTCQ9NRP0 149 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 TECRQ9NZ01 308 aaKnown RBP10.11□□□□□ -0.79
NUP88-201ENST00000225696 SLC25A10Q9UBX3 287 aaPredicted RBP10.11□□□□□ -0.79
NUP88-201ENST00000225696 TP73-AS1Q9UF72 201 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 ISLRO14498 428 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 SIAH2O43255 324 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 TCF21O43680 179 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 IGHV3-48P01763 117 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 COL5A1-AS1Q5SY13 56 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 MBNL2Q5VZF2 373 aaKnown RBP10.11□□□□□ -0.79
NUP88-201ENST00000225696 SLC35E1Q96K37 410 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 CLEC7AQ9BXN2 247 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 DNAJC4Q9NNZ3 241 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 DCAF16Q9NXF7 216 aa10.11□□□□□ -0.79
NUP88-201ENST00000225696 CSMD1Q96PZ7 3565 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 DPRXA6NFQ7 191 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 E7EUB6 86 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 IGLV1-44P01699 117 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 AMY1AP04745 511 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 GPR6P46095 362 aaPredicted RBP10.1□□□□□ -0.79
NUP88-201ENST00000225696 PPOXP50336 477 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 PRRX1P54821 245 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 RELQ04864 619 aaPredicted RBP10.1□□□□□ -0.79
NUP88-201ENST00000225696 WDR73Q6P4I2 378 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 Q6ZN92 141 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 ZNF439Q8NDP4 499 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 OR2T6Q8NHC8 308 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 C18orf32Q8TCD1 76 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 TMEM167BQ9NRX6 74 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 ZNF355PQ9NSJ1 428 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 ZFP30Q9Y2G7 519 aa10.1□□□□□ -0.79
NUP88-201ENST00000225696 TEX50A0A1B0GTY4 177 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 A0A1W2PN81 502 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 SPRY3O43610 288 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 APCSP02743 223 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 MT-ND6P03923 174 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 OR5G3P0C626 314 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 LINC00614P0C842 121 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 PYYP10082 97 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 TNXAQ16473 311 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 VHLLQ6RSH7 139 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 LHFPL4Q7Z7J7 247 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 DEFB108BQ8NET1 73 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 RND1Q92730 232 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 FAM167A-AS1Q96KT0 104 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 FER1L6-AS2Q96M78 137 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 SLC25A33Q9BSK2 321 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 SSBP4Q9BWG4 385 aaPredicted RBP10.09□□□□□ -0.79
NUP88-201ENST00000225696 PLEKHA3Q9HB20 300 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 CEP250Q9BV73 2442 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 ABCA1O95477 2261 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 VWC2LB2RUY7 222 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 CT45A6P0DMU7 189 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 CT45A5P0DMU8 189 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 CT45A7P0DMV0 189 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 WT1P19544 449 aaPredicted RBP10.09□□□□□ -0.79
NUP88-201ENST00000225696 USF1P22415 310 aaPredicted RBP10.09□□□□□ -0.79
NUP88-201ENST00000225696 KIR2DS2P43631 304 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 SPATA12Q7Z6I5 190 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 SPACA3Q8IXA5 215 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 KIR3DL3Q8N743 410 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 TXN2Q99757 166 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 SLC25A2Q9BXI2 301 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 LAMTOR2Q9Y2Q5 125 aa10.09□□□□□ -0.79
NUP88-201ENST00000225696 KBTBD11-OT1A0A1B0GTJ5 212 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 SP9P0CG40 484 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 PRCDQ00LT1 54 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 SGK494Q96LW2 274 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 UQCR10Q9UDW1 63 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 ATMQ13315 3056 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 ZZEF1O43149 2961 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 PSMB11A5LHX3 300 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 CORTO00230 105 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 UPK2O00526 184 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 LHBP01229 141 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 CD59P13987 128 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 CD24P25063 80 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 HINT1P49773 126 aaPredicted RBP10.08□□□□□ -0.8
NUP88-201ENST00000225696 RPL8P62917 257 aaKnown RBP10.08□□□□□ -0.8
NUP88-201ENST00000225696 EBLN2Q6P2I7 272 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 TMEM178AQ8NBL3 297 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 ITLN1Q8WWA0 313 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 PPP1R14DQ9NXH3 145 aa10.08□□□□□ -0.8
NUP88-201ENST00000225696 IZUMO1RA6ND01 250 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 CCL25O15444 150 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 HLA-DQA1P01909 254 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 ZNF883P0CG24 379 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 RNASE2P10153 161 aaKnown RBP10.07□□□□□ -0.8
NUP88-201ENST00000225696 MFAP2P55001 183 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 ZNF841Q6ZN19 808 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 ARL2-SNX15V9GYD0 113 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 TANC2Q9HCD6 1990 aa10.07□□□□□ -0.8
NUP88-201ENST00000225696 A0A1W2PRE2 83 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms