RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 SLURP1P55000 103 aa16.74■□□□□ 0.27
SLC25A39-201ENST00000225308 RRAS2P62070 204 aaPredicted RBP16.74■□□□□ 0.27
SLC25A39-201ENST00000225308 OR1L6Q8NGR2 347 aa16.74■□□□□ 0.27
SLC25A39-201ENST00000225308 CACFD1Q9UGQ2 172 aa16.74■□□□□ 0.27
SLC25A39-201ENST00000225308 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.73■□□□□ 0.27
SLC25A39-201ENST00000225308 IFNA21P01568 189 aa16.73■□□□□ 0.27
SLC25A39-201ENST00000225308 OR1S1Q8NH92 325 aa16.73■□□□□ 0.27
SLC25A39-201ENST00000225308 K7EIM0 57 aa16.72■□□□□ 0.27
SLC25A39-201ENST00000225308 IGHV3-23P01764 117 aa16.72■□□□□ 0.27
SLC25A39-201ENST00000225308 RNASE2P10153 161 aaKnown RBP16.72■□□□□ 0.27
SLC25A39-201ENST00000225308 HOXD3P31249 432 aaPredicted RBP16.72■□□□□ 0.27
SLC25A39-201ENST00000225308 SNCAP37840 140 aa16.72■□□□□ 0.27
SLC25A39-201ENST00000225308 BSXQ3C1V8 233 aa16.72■□□□□ 0.27
SLC25A39-201ENST00000225308 C11orf87Q6NUJ2 197 aa16.72■□□□□ 0.27
SLC25A39-201ENST00000225308 CXorf58Q96LI9 332 aa16.72■□□□□ 0.27
SLC25A39-201ENST00000225308 ENY2Q9NPA8 101 aa16.72■□□□□ 0.27
SLC25A39-201ENST00000225308 CEBPZOSA8MTT3 80 aa16.71■□□□□ 0.27
SLC25A39-201ENST00000225308 BMPR1BO00238 502 aa16.71■□□□□ 0.27
SLC25A39-201ENST00000225308 CCSO14618 274 aa16.71■□□□□ 0.27
SLC25A39-201ENST00000225308 GOSR2O14653 212 aa16.71■□□□□ 0.27
SLC25A39-201ENST00000225308 IGLL1P15814 213 aa16.71■□□□□ 0.27
SLC25A39-201ENST00000225308 FCN2Q15485 313 aa16.71■□□□□ 0.27
SLC25A39-201ENST00000225308 ZNF502Q8TBZ5 544 aa16.71■□□□□ 0.27
SLC25A39-201ENST00000225308 DLX4Q92988 240 aaPredicted RBP16.71■□□□□ 0.27
SLC25A39-201ENST00000225308 EEF1AKMT3Q96AZ1 226 aa16.71■□□□□ 0.27
SLC25A39-201ENST00000225308 HEYLQ9NQ87 328 aaPredicted RBP16.71■□□□□ 0.27
SLC25A39-201ENST00000225308 MGAT4CQ9UBM8 478 aa16.71■□□□□ 0.27
SLC25A39-201ENST00000225308 OXLD1Q5BKU9 147 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 PVRIGQ6DKI7 326 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 OR11H7Q8NGC8 314 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 VN1R17PQ8TDU5 208 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 DCUN1D4Q92564 292 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 RCC1LQ96I51 464 aaKnown RBP16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 TRBV7-1A0A0A6YYK4 115 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 IGHV3-21A0A0B4J1V1 117 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 FAM25EA8MYX2 175 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 CXCL3P19876 107 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 ZP3P21754 424 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 FAM209BQ5JX69 171 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 CLEC19AQ6UXS0 136 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 SCARB1Q8WTV0 552 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 MISP3Q96FF7 219 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 OR10C1Q96KK4 312 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 RBKSQ9H477 322 aa16.7■□□□□ 0.26
SLC25A39-201ENST00000225308 C5orf51A6NDU8 294 aa16.69■□□□□ 0.26
SLC25A39-201ENST00000225308 PPP5D1E7EU14 171 aa16.69■□□□□ 0.26
SLC25A39-201ENST00000225308 G3V4G9 280 aa16.69■□□□□ 0.26
SLC25A39-201ENST00000225308 I3L2K1 104 aa16.69■□□□□ 0.26
SLC25A39-201ENST00000225308 SAMD5Q5TGI4 173 aa16.69■□□□□ 0.26
SLC25A39-201ENST00000225308 GSG1LQ6UXU4 331 aa16.69■□□□□ 0.26
SLC25A39-201ENST00000225308 DTD1Q8TEA8 209 aa16.69■□□□□ 0.26
SLC25A39-201ENST00000225308 FAM90A26D6RGX4 464 aa16.68■□□□□ 0.26
SLC25A39-201ENST00000225308 SIX6O95475 246 aa16.68■□□□□ 0.26
SLC25A39-201ENST00000225308 HTR2BP41595 481 aa16.68■□□□□ 0.26
SLC25A39-201ENST00000225308 TMEM170AQ8WVE7 144 aa16.68■□□□□ 0.26
SLC25A39-201ENST00000225308 SORL1Q92673 2214 aa16.68■□□□□ 0.26
SLC25A39-201ENST00000225308 BCAP31P51572 246 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 SUB1P53999 127 aaKnown RBP eCLIP16.67■□□□□ 0.268e-9■□□□□ 8.7
SLC25A39-201ENST00000225308 H2BFSP57053 126 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 KLF5Q13887 457 aaPredicted RBP16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 SLC24A4Q8NFF2 622 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 PINX1Q96BK5 328 aaKnown RBP16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 HIPK2Q9H2X6 1198 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 C21orf62Q9NYP8 219 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 F8W735 103 aaPredicted RBP16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 OVOL1O14753 267 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 MT-CO2P00403 227 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 CLEC3BP05452 202 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 GPR183P32249 361 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 RPEL1Q2QD12 228 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 IAH1Q2TAA2 248 aaPredicted RBP16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 C1QL4Q86Z23 238 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 OR4D5Q8NGN0 318 aa16.67■□□□□ 0.26
SLC25A39-201ENST00000225308 ARL3P36405 182 aa16.66■□□□□ 0.26
SLC25A39-201ENST00000225308 C2orf83Q53S99 150 aa16.66■□□□□ 0.26
SLC25A39-201ENST00000225308 MCRIP2Q9BUT9 160 aaKnown RBP16.66■□□□□ 0.26
SLC25A39-201ENST00000225308 MAGT1Q9H0U3 335 aa16.66■□□□□ 0.26
SLC25A39-201ENST00000225308 IGHV3-48P01763 117 aa16.65■□□□□ 0.26
SLC25A39-201ENST00000225308 ID3Q02535 119 aa16.65■□□□□ 0.26
SLC25A39-201ENST00000225308 C2orf50Q96LR7 162 aa16.65■□□□□ 0.26
SLC25A39-201ENST00000225308 GSKIPQ9P0R6 139 aa16.65■□□□□ 0.26
SLC25A39-201ENST00000225308 CORTO00230 105 aa16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 GGCTO75223 188 aaKnown RBP16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 NPY1RP25929 384 aa16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 SYNJ2BPP57105 145 aa16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 ZBTB8BQ8NAP8 495 aaPredicted RBP16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 CHAC2Q8WUX2 184 aa16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 ATP6V0BQ99437 205 aa16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 ZNF436Q9C0F3 470 aaPredicted RBP16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 FNDC4Q9H6D8 234 aaPredicted RBP16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 ZC4H2Q9NQZ6 224 aa16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 U3KQ87 197 aa16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 DNAH3Q8TD57 4116 aa16.64■□□□□ 0.25
SLC25A39-201ENST00000225308 OR2T8A6NH00 312 aa16.63■□□□□ 0.25
SLC25A39-201ENST00000225308 SEC14L6B5MCN3 397 aa16.63■□□□□ 0.25
SLC25A39-201ENST00000225308 SYNGR2O43760 224 aa16.63■□□□□ 0.25
SLC25A39-201ENST00000225308 OR2C1O95371 312 aa16.63■□□□□ 0.25
SLC25A39-201ENST00000225308 TGOLN2O43493 480 aa16.63■□□□□ 0.25
SLC25A39-201ENST00000225308 WIPF1O43516 503 aa16.63■□□□□ 0.25
SLC25A39-201ENST00000225308 MED6O75586 246 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms