RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 CACNG5Q9UF02 275 aa11.35□□□□□ -0.59
PCOLCE-201ENST00000223061 A0A0B4J2A0 478 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 LINC01619G3V211 115 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 NDUFB8O95169 186 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 SIX6O95475 246 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 IFNA17P01571 189 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 HSPB1P04792 205 aaKnown RBP11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 OR8U8P0C7N1 319 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 CXCL2P19875 107 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 SLURP1P55000 103 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 PRCDQ00LT1 54 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 EXOSC2Q13868 293 aaKnown RBP11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 OXLD1Q5BKU9 147 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 LYZL2Q7Z4W2 148 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 ZNF429Q86V71 674 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 PDCD10Q9BUL8 212 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 PLEKHA3Q9HB20 300 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 SHPKQ9UHJ6 478 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 S4R3C0 116 aa11.34□□□□□ -0.59
PCOLCE-201ENST00000223061 IGLV11-55A0A075B6I3 123 aa11.33□□□□□ -0.6
PCOLCE-201ENST00000223061 SFT2D2O95562 160 aa11.33□□□□□ -0.6
PCOLCE-201ENST00000223061 MPC2O95563 127 aa11.33□□□□□ -0.6
PCOLCE-201ENST00000223061 HIST1H1BP16401 226 aaKnown RBP11.33□□□□□ -0.6
PCOLCE-201ENST00000223061 ANKRD55Q3KP44 614 aa11.33□□□□□ -0.6
PCOLCE-201ENST00000223061 ZNF343Q6P1L6 599 aa11.33□□□□□ -0.6
PCOLCE-201ENST00000223061 DMRT1Q9Y5R6 373 aa11.33□□□□□ -0.6
PCOLCE-201ENST00000223061 TRBV12-3P01733 135 aa11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 IGHV3-23P01764 117 aa11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 S100A11P31949 105 aa11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 SLC25A24Q6NUK1 477 aa11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 WDR89Q96FK6 387 aaPredicted RBP11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 RCC1LQ96I51 464 aaKnown RBP11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 PEF1Q9UBV8 284 aaKnown RBP11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 UBQLN2Q9UHD9 624 aa11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 LINC00862A6NCI5 91 aa11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 CYB5BO43169 146 aa11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 NXPH3O95157 252 aa11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 SLC25A4P12235 298 aa11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 HOXA1P49639 335 aaPredicted RBP11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 CLLU1Q5K131 121 aa11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 F11RQ9Y624 299 aaKnown RBP11.32□□□□□ -0.6
PCOLCE-201ENST00000223061 MFAP2P55001 183 aa11.31□□□□□ -0.6
PCOLCE-201ENST00000223061 NMSQ5H8A3 153 aa11.31□□□□□ -0.6
PCOLCE-201ENST00000223061 SAMD5Q5TGI4 173 aa11.31□□□□□ -0.6
PCOLCE-201ENST00000223061 TMUB2Q71RG4 321 aa11.31□□□□□ -0.6
PCOLCE-201ENST00000223061 OR2C3Q8N628 320 aa11.31□□□□□ -0.6
PCOLCE-201ENST00000223061 DCUN1D4Q92564 292 aa11.31□□□□□ -0.6
PCOLCE-201ENST00000223061 DLX4Q92988 240 aaPredicted RBP11.31□□□□□ -0.6
PCOLCE-201ENST00000223061 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
PCOLCE-201ENST00000223061 NOTCH1P46531 2555 aa11.3□□□□□ -0.6
PCOLCE-201ENST00000223061 TRAV14DV4A0A0A6YYC5 116 aa11.3□□□□□ -0.6
PCOLCE-201ENST00000223061 MFSD2BA6NFX1 497 aa11.3□□□□□ -0.6
PCOLCE-201ENST00000223061 ARPC5O15511 151 aa11.3□□□□□ -0.6
PCOLCE-201ENST00000223061 HOXD3P31249 432 aaPredicted RBP11.3□□□□□ -0.6
PCOLCE-201ENST00000223061 ERHP84090 104 aaKnown RBP11.3□□□□□ -0.6
PCOLCE-201ENST00000223061 KLK9Q2XQG4 91 aa11.3□□□□□ -0.6
PCOLCE-201ENST00000223061 EEF1AKMT3Q96AZ1 226 aa11.3□□□□□ -0.6
PCOLCE-201ENST00000223061 THYN1Q9P016 225 aa11.3□□□□□ -0.6
PCOLCE-201ENST00000223061 KLK9Q9UKQ9 250 aa11.3□□□□□ -0.6
PCOLCE-201ENST00000223061 NOTCH3Q9UM47 2321 aa11.3□□□□□ -0.6
PCOLCE-201ENST00000223061 FXYD6-FXYD2A0A087WZ82 144 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 IGHV3-21A0A0B4J1V1 117 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 PIGBOS1A0A0B4J2F0 54 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 A0A0D9SG52 128 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 SPCS3P61009 180 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 CYCSP99999 105 aaKnown RBP11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 ZNF345Q14585 488 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 SMCO1Q147U7 214 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 LRTM2Q8N967 370 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 MCRIP2Q9BUT9 160 aaKnown RBP11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 MEGF8Q7Z7M0 2845 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 DUXBA0A1W2PPF3 345 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 SEC14L6B5MCN3 397 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 PPP5D1E7EU14 171 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 OVOL1O14753 267 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 HOXB5P09067 269 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 ZP3P21754 424 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 SNCAP37840 140 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 AARDQ4LEZ3 155 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 C11orf87Q6NUJ2 197 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 CLEC19AQ6UXS0 136 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 OR1L6Q8NGR2 347 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 OR1P1Q8NH06 330 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 COQ8AQ8NI60 647 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 MISP3Q96FF7 219 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 CXorf58Q96LI9 332 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 CCDC140Q96MF4 163 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 NMES1Q9C002 83 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 MFFQ9GZY8 342 aa11.29□□□□□ -0.6
PCOLCE-201ENST00000223061 RPS10-NUDT3A0A1W2PQS6 291 aa11.28□□□□□ -0.6
PCOLCE-201ENST00000223061 CEBPZOSA8MTT3 80 aa11.28□□□□□ -0.6
PCOLCE-201ENST00000223061 BMPR1BO00238 502 aa11.28□□□□□ -0.6
PCOLCE-201ENST00000223061 CFDP00746 253 aaPredicted RBP11.28□□□□□ -0.6
PCOLCE-201ENST00000223061 RAB14P61106 215 aa11.28□□□□□ -0.6
PCOLCE-201ENST00000223061 OR2F1Q13607 317 aa11.28□□□□□ -0.6
PCOLCE-201ENST00000223061 RPEL1Q2QD12 228 aa11.28□□□□□ -0.6
PCOLCE-201ENST00000223061 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
PCOLCE-201ENST00000223061 GSG1LQ6UXU4 331 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms