RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ZNF324O75467 553 aaPredicted RBP9.62□□□□□ -0.87
NOD1-201ENST00000222823 FOXA3P55318 350 aaPredicted RBP9.62□□□□□ -0.87
NOD1-201ENST00000222823 RRN3P1Q2M238 152 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 RNASEH2CQ8TDP1 164 aaKnown RBP9.62□□□□□ -0.87
NOD1-201ENST00000222823 NABP1Q96AH0 204 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 SAA2-SAA4A0A096LPE2 208 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 SIAH2O43255 324 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 NUDT3O95989 172 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 SAA1P0DJI8 122 aaPredicted RBP9.62□□□□□ -0.87
NOD1-201ENST00000222823 SAA2P0DJI9 122 aaPredicted RBP9.62□□□□□ -0.87
NOD1-201ENST00000222823 TSPOP30536 169 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 HIST1H1AQ02539 215 aaPredicted RBP9.62□□□□□ -0.87
NOD1-201ENST00000222823 RTN4RL2Q86UN3 420 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 MIEN1Q9BRT3 115 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 ATG101Q9BSB4 218 aa9.62□□□□□ -0.87
NOD1-201ENST00000222823 SPATA45Q537H7 98 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 C18orf12Q96KH6 178 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 IGHV1-18A0A0C4DH31 117 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 SLC17A3O00476 420 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 FGF16O43320 207 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 TFF1P04155 84 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 ATP5G3P48201 142 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 FOXF2Q12947 444 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 ATRAIDQ6UW56 229 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 LHFPL1Q86WI0 220 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 RAX2Q96IS3 184 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 A1L4Q6 167 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 ETV2O00321 342 aaPredicted RBP9.61□□□□□ -0.87
NOD1-201ENST00000222823 UPK2O00526 184 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 SNRPD3P62318 126 aaKnown RBP9.61□□□□□ -0.87
NOD1-201ENST00000222823 HBBP68871 147 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 UQCR10Q9UDW1 63 aa9.61□□□□□ -0.87
NOD1-201ENST00000222823 ZMAT5Q9UDW3 170 aaKnown RBP9.61□□□□□ -0.87
NOD1-201ENST00000222823 SCO2A0A1W2PP80 73 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 RBFOX2O43251 390 aaKnown RBP eCLIP9.6□□□□□ -0.87
NOD1-201ENST00000222823 IGKV3-20P01619 116 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 IGHV3-23P01764 117 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 HLA-DRB1P01911 266 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 OTX1P32242 354 aaPredicted RBP9.6□□□□□ -0.87
NOD1-201ENST00000222823 GPR183P32249 361 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 AMMECR1LQ6DCA0 310 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 FAM159AQ6UWV7 190 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 FAM168AQ92567 244 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 TMEM70Q9BUB7 260 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 PNRC2Q9NPJ4 139 aaKnown RBP9.6□□□□□ -0.87
NOD1-201ENST00000222823 IGHV3OR16-8A0A075B7F1 116 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 PEX7O00628 323 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 ZNF207O43670 478 aaKnown RBP9.6□□□□□ -0.87
NOD1-201ENST00000222823 CDKN1AP38936 164 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 C12orf54Q6X4T0 127 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 KLK15Q9H2R5 256 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 C7orf69Q9H7B7 122 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 FAM74A4Q5TZK3 123 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 MIR17HGQ75NE6 70 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 PPP1R27Q86WC6 154 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 ARPC1AQ92747 370 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 WNT10AQ9GZT5 417 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 CEP350Q5VT06 3117 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 A0A0G2JLM5 398 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 FBLL1A6NHQ2 334 aaKnown RBP9.6□□□□□ -0.87
NOD1-201ENST00000222823 RAMP3O60896 148 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 CD55P08174 381 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 HINT1P49773 126 aaPredicted RBP9.6□□□□□ -0.87
NOD1-201ENST00000222823 RNF166Q96A37 237 aaPredicted RBP9.6□□□□□ -0.87
NOD1-201ENST00000222823 GPR82Q96P67 336 aa9.6□□□□□ -0.87
NOD1-201ENST00000222823 CACNA1AO00555 2505 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 LYNX1G3V0Z9 82 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 WISP1O95388 367 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 LYNX1P0DP58 116 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 GLRX5Q86SX6 157 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 TEX45Q8NA69 505 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 TMEM133Q9H2Q1 129 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 RAXQ9Y2V3 346 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 DENND4AQ7Z401 1863 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 E9PLN8 166 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 DDTP30046 118 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 DUTP33316 252 aaKnown RBP9.59□□□□□ -0.87
NOD1-201ENST00000222823 SLC25A34Q6PIV7 304 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 LINC00518Q8N0U6 118 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 VKORC1Q9BQB6 163 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 SDF2L1Q9HCN8 221 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 TRBV20OR9-2A0A075B6H5 130 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 PRSS2P07478 247 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 STAG3L2P0CL84 134 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 PRB3Q04118 309 aaPredicted RBP9.59□□□□□ -0.87
NOD1-201ENST00000222823 C19orf54Q5BKX5 351 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 IL36BQ9NZH7 164 aa9.59□□□□□ -0.87
NOD1-201ENST00000222823 IGHV3-66A0A0C4DH42 116 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 C15orf61A6NNL5 157 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 SRRM5B3KS81 715 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 GCSHP23434 173 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 TBR1Q16650 682 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 ZNF324BQ6AW86 544 aaPredicted RBP9.58□□□□□ -0.88
NOD1-201ENST00000222823 TMEM136Q6ZRR5 245 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 SPACA3Q8IXA5 215 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 LRTM2Q8N967 370 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 KCNS1Q96KK3 526 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 KIR2DL4Q99706 377 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 TMEM238LA0A1B0GVL6 79 aa9.58□□□□□ -0.88
NOD1-201ENST00000222823 A6NJY4 79 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms