RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 NFAM1Q8NET5 270 aaPredicted RBP9.44□□□□□ -0.9
USP31-201ENST00000219689 INSIG2Q9Y5U4 225 aa9.44□□□□□ -0.9
USP31-201ENST00000219689 MPZP25189 248 aa9.44□□□□□ -0.9
USP31-201ENST00000219689 C1orf43Q9BWL3 253 aa9.44□□□□□ -0.9
USP31-201ENST00000219689 ZNHIT1O43257 154 aa9.44□□□□□ -0.9
USP31-201ENST00000219689 TNFRSF19Q9NS68 423 aa9.44□□□□□ -0.9
USP31-201ENST00000219689 THAP10Q9P2Z0 257 aaPredicted RBP9.44□□□□□ -0.9
USP31-201ENST00000219689 ATG2AQ2TAZ0 1938 aa9.44□□□□□ -0.9
USP31-201ENST00000219689 IGKCP01834 107 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 TMPRSS3P57727 454 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 ASPHD2Q6ICH7 369 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 IGKV3OR2-268A0A0C4DH90 116 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 SYNGR3O43761 229 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 CDPF1Q6NVV7 123 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 ABHD12Q8N2K0 398 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 OR51G1Q8NGK1 321 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 FAM90A26D6RGX4 464 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 HS3ST3B1Q9Y662 390 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 NGFRP08138 427 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 MPC1Q9Y5U8 109 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 TRBV7-9A0A0J9YWB2 115 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 K7EQS6 105 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 TMEM242Q9NWH2 141 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 COL16A1Q07092 1604 aaPredicted RBP9.43□□□□□ -0.9
USP31-201ENST00000219689 C18orf12Q96KH6 178 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 IL6RP08887 468 aaPredicted RBP9.43□□□□□ -0.9
USP31-201ENST00000219689 MST1P26927 711 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 SRD5A2P31213 254 aa9.43□□□□□ -0.9
USP31-201ENST00000219689 TMEM144Q7Z5S9 345 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 WISP3O95389 354 aaPredicted RBP9.42□□□□□ -0.9
USP31-201ENST00000219689 WDR82Q6UXN9 313 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 GTSCR1Q86UQ5 136 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 PLPPR1Q8TBJ4 325 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 GAGE12HA6NDE8 117 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 LHX2P50458 406 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 B5MCH6 92 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.42□□□□□ -0.9
USP31-201ENST00000219689 SARAFQ96BY9 339 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 JMJD8Q96S16 334 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 K7EP13 123 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 OR9G4Q8NGQ1 327 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 A0A0J9YW62 118 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 NKX2-8O15522 239 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 MOSP00540 346 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 CD55P08174 381 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 CEACAM8P31997 349 aaPredicted RBP9.42□□□□□ -0.9
USP31-201ENST00000219689 C1orf100Q5SVJ3 147 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 C19orf48Q6RUI8 117 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 Q6ZNB5 142 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 OCC1Q8TAD7 63 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 TRBV24-1A0A075B6N3 115 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 MFAP4P55083 255 aa9.42□□□□□ -0.9
USP31-201ENST00000219689 MCRIP2Q9BUT9 160 aaKnown RBP9.42□□□□□ -0.9
USP31-201ENST00000219689 MRPL32Q9BYC8 188 aaKnown RBP9.42□□□□□ -0.9
USP31-201ENST00000219689 FNDC1Q4ZHG4 1894 aaPredicted RBP9.41□□□□□ -0.9
USP31-201ENST00000219689 PAPPAQ13219 1627 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 TMEM8BA6NDV4 472 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 H0YIZ8 118 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 RAB1CQ92928 201 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 ZNF815PA8K554 130 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 CD5LO43866 347 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 TRACP01848 142 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 NPC2P61916 151 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 PRSS53Q2L4Q9 553 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 CEACAM21Q3KPI0 293 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 C9orf118A6NHY6 69 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 FGF12P61328 243 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 FAM90A2PQ658T7 463 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 C2orf82Q6UX34 121 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 CD27P26842 260 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 GNG5P63218 68 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 LIMS2Q7Z4I7 341 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 LRTM2Q8N967 370 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 A0A1W2PRE2 83 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 FBXW9Q5XUX1 488 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 FMC1Q96HJ9 113 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 SAA1P0DJI8 122 aaPredicted RBP9.41□□□□□ -0.9
USP31-201ENST00000219689 PLNP26678 52 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 IGKV1D-16P01601 117 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 NPIPB3Q92617 1050 aa9.41□□□□□ -0.9
USP31-201ENST00000219689 INO80CQ6PI98 192 aaPredicted RBP9.4□□□□□ -0.9
USP31-201ENST00000219689 UCN2Q96RP3 112 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 ERG28Q9UKR5 140 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 DYNLRB2Q8TF09 96 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 Q96M66 194 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 H3BRM9 83 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 C3orf79P0CE67 100 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 ZIC1Q15915 447 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 RAB1BQ9H0U4 201 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 ABCA12Q86UK0 2595 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 USP24Q9UPU5 2620 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 ATXN8Q156A1 80 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 FOXI3A8MTJ6 420 aaPredicted RBP9.4□□□□□ -0.9
USP31-201ENST00000219689 PTCRAQ6ISU1 281 aaPredicted RBP9.4□□□□□ -0.9
USP31-201ENST00000219689 MIR17HGQ75NE6 70 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 SMIM20Q8N5G0 67 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 LEAP2Q969E1 77 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 C19orf24Q9BVV8 132 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 YAE1D1Q9NRH1 226 aa9.4□□□□□ -0.9
USP31-201ENST00000219689 PILRBQ9UKJ0 227 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms