RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PIKFYVEQ9Y2I7 2098 aa15.8■□□□□ 0.12
SMPD3-201ENST00000219334 A0A1B0GUT8 65 aa15.8■□□□□ 0.12
SMPD3-201ENST00000219334 GATA2P23769 480 aaPredicted RBP15.8■□□□□ 0.12
SMPD3-201ENST00000219334 TOMM7Q9P0U1 55 aa15.8■□□□□ 0.12
SMPD3-201ENST00000219334 C15orf61A6NNL5 157 aa15.79■□□□□ 0.12
SMPD3-201ENST00000219334 CD7P09564 240 aa15.79■□□□□ 0.12
SMPD3-201ENST00000219334 SLC25A34Q6PIV7 304 aa15.79■□□□□ 0.12
SMPD3-201ENST00000219334 GTF3AQ92664 365 aaKnown RBP15.79■□□□□ 0.12
SMPD3-201ENST00000219334 GRIFINA4D1Z8 144 aa15.79■□□□□ 0.12
SMPD3-201ENST00000219334 CD8AP01732 235 aa15.79■□□□□ 0.12
SMPD3-201ENST00000219334 IGFBP3P17936 291 aaPredicted RBP15.79■□□□□ 0.12
SMPD3-201ENST00000219334 C17orf82Q86X59 251 aaPredicted RBP15.79■□□□□ 0.12
SMPD3-201ENST00000219334 LRTM2Q8N967 370 aa15.79■□□□□ 0.12
SMPD3-201ENST00000219334 GLMPQ8WWB7 406 aa15.79■□□□□ 0.12
SMPD3-201ENST00000219334 FAM71F2Q6NXP2 309 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 FER1L6-AS1Q8NA97 138 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 TRAV41A0A0B4J266 112 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 CMC4P56277 68 aaPredicted RBP15.78■□□□□ 0.12
SMPD3-201ENST00000219334 Q6AWC8 147 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 MIR17HGQ75NE6 70 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 BIVMQ86UB2 503 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 TFF1P04155 84 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 FOXA3P55318 350 aaPredicted RBP15.78■□□□□ 0.12
SMPD3-201ENST00000219334 ZNF506Q5JVG8 444 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 LAIR2Q6ISS4 152 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 ASCL2Q99929 193 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 OTORQ9NRC9 128 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 TMEM160Q9NX00 188 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 NEUROG3Q9Y4Z2 214 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 TMEM8BA6NDV4 472 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 CDX1P47902 265 aaPredicted RBP15.78■□□□□ 0.12
SMPD3-201ENST00000219334 MUC21Q5SSG8 566 aa15.78■□□□□ 0.12
SMPD3-201ENST00000219334 RTBDNQ9BSG5 229 aaPredicted RBP15.78■□□□□ 0.12
SMPD3-201ENST00000219334 MUC21A0A0G2JKD1 596 aa15.77■□□□□ 0.12
SMPD3-201ENST00000219334 MUC21A0A140T8X8 626 aa15.77■□□□□ 0.12
SMPD3-201ENST00000219334 FAM131CQ96AQ9 280 aa15.77■□□□□ 0.12
SMPD3-201ENST00000219334 LYZL4Q96KX0 146 aa15.77■□□□□ 0.12
SMPD3-201ENST00000219334 CCL1P22362 96 aa15.77■□□□□ 0.12
SMPD3-201ENST00000219334 ZP1P60852 638 aa15.77■□□□□ 0.12
SMPD3-201ENST00000219334 PAX8Q06710 450 aa15.77■□□□□ 0.12
SMPD3-201ENST00000219334 C3orf36Q3SXR2 165 aa15.77■□□□□ 0.12
SMPD3-201ENST00000219334 COL5A1-AS1Q5SY13 56 aa15.77■□□□□ 0.12
SMPD3-201ENST00000219334 SCGB3A1Q96QR1 104 aa15.77■□□□□ 0.12
SMPD3-201ENST00000219334 MTCL1Q9Y4B5 1905 aaKnown RBP15.77■□□□□ 0.11
SMPD3-201ENST00000219334 FABP5P3A8MUU1 101 aa15.77■□□□□ 0.11
SMPD3-201ENST00000219334 COL6A6A6NMZ7 2263 aa15.77■□□□□ 0.11
SMPD3-201ENST00000219334 SHISA3A0PJX4 238 aa15.77■□□□□ 0.11
SMPD3-201ENST00000219334 SAP30O75446 220 aa15.77■□□□□ 0.11
SMPD3-201ENST00000219334 GGNQ86UU5 652 aa15.77■□□□□ 0.11
SMPD3-201ENST00000219334 OR5AN1Q8NGI8 311 aa15.77■□□□□ 0.11
SMPD3-201ENST00000219334 ZNF414Q96IQ9 312 aa15.77■□□□□ 0.11
SMPD3-201ENST00000219334 LINC00527Q9UJ94 153 aa15.77■□□□□ 0.11
SMPD3-201ENST00000219334 TRGV4A0A0C4DH28 118 aa15.76■□□□□ 0.11
SMPD3-201ENST00000219334 ZNF585BQ52M93 769 aa15.76■□□□□ 0.11
SMPD3-201ENST00000219334 F11RQ9Y624 299 aaKnown RBP15.76■□□□□ 0.11
SMPD3-201ENST00000219334 ATP5LO75964 103 aa15.76■□□□□ 0.11
SMPD3-201ENST00000219334 RPP21Q9H633 154 aaKnown RBP15.76■□□□□ 0.11
SMPD3-201ENST00000219334 A0A1B0GW15 77 aa15.76■□□□□ 0.11
SMPD3-201ENST00000219334 VMO1Q7Z5L0 202 aa15.76■□□□□ 0.11
SMPD3-201ENST00000219334 FGFBP3Q8TAT2 258 aa15.76■□□□□ 0.11
SMPD3-201ENST00000219334 A0A0G2JNJ9 132 aa15.76■□□□□ 0.11
SMPD3-201ENST00000219334 CACNG7P62955 275 aa15.76■□□□□ 0.11
SMPD3-201ENST00000219334 Q9UFV3 132 aa15.76■□□□□ 0.11
SMPD3-201ENST00000219334 SRRM5B3KS81 715 aa15.75■□□□□ 0.11
SMPD3-201ENST00000219334 MALP21145 153 aa15.75■□□□□ 0.11
SMPD3-201ENST00000219334 C18orf15Q96N68 181 aa15.75■□□□□ 0.11
SMPD3-201ENST00000219334 DTX2Q86UW9 622 aa15.75■□□□□ 0.11
SMPD3-201ENST00000219334 GAGE10A6NGK3 116 aa15.75■□□□□ 0.11
SMPD3-201ENST00000219334 DEFB121Q5J5C9 76 aa15.75■□□□□ 0.11
SMPD3-201ENST00000219334 Q6ZS92 163 aa15.75■□□□□ 0.11
SMPD3-201ENST00000219334 UQCR10Q9UDW1 63 aa15.75■□□□□ 0.11
SMPD3-201ENST00000219334 SOX21Q9Y651 276 aaPredicted RBP15.75■□□□□ 0.11
SMPD3-201ENST00000219334 IGHV2-26A0A0B4J1V2 119 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 IGKV1-9A0A0C4DH69 117 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 FOXG1P55316 489 aaPredicted RBP15.74■□□□□ 0.11
SMPD3-201ENST00000219334 SCO2A0A1W2PP80 73 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 SLC25A15Q9Y619 301 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 TRAV21A0A0B4J279 112 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 IGKV1D-13A0A0B4J2D9 117 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 IGKV1-13P0DP09 117 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 MINOS1Q5TGZ0 78 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 SSC4DQ8WTU2 575 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 RPUSD1Q9UJJ7 312 aaKnown RBP15.74■□□□□ 0.11
SMPD3-201ENST00000219334 MINOS1-NBL1R4GNA1 71 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 OOSP1A8MZH6 123 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 BEX4Q9NWD9 120 aaPredicted RBP15.74■□□□□ 0.11
SMPD3-201ENST00000219334 SLC25A16P16260 332 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 CBLN1P23435 193 aa15.74■□□□□ 0.11
SMPD3-201ENST00000219334 HOXA5P20719 270 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 TMEM178BH3BS89 294 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 Q5BKY6 102 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 TMEM42Q69YG0 159 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 ZNF525Q8N782 197 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 MDS2Q8NDY4 140 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 FBLN5Q9UBX5 448 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 TRAV8-6A0A0B4J262 113 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 CRYGSP22914 178 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 DUTP33316 252 aaKnown RBP15.73■□□□□ 0.11
SMPD3-201ENST00000219334 PRCDQ00LT1 54 aa15.73■□□□□ 0.11
SMPD3-201ENST00000219334 IL36BQ9NZH7 164 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms