RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 C11orf1Q9H5F2 150 aa21.2■□□□□ 0.98
CHMP4B-201ENST00000217402 STRAPQ9Y3F4 350 aaKnown RBP21.2■□□□□ 0.98
CHMP4B-201ENST00000217402 IGHV3-21A0A0B4J1V1 117 aa21.19■□□□□ 0.98
CHMP4B-201ENST00000217402 TCRBV4S1A1TA0A5B7 111 aa21.19■□□□□ 0.98
CHMP4B-201ENST00000217402 BRI3O95415 125 aa21.19■□□□□ 0.98
CHMP4B-201ENST00000217402 PET100P0DJ07 73 aa21.19■□□□□ 0.98
CHMP4B-201ENST00000217402 RPP30P78346 268 aaKnown RBP21.19■□□□□ 0.98
CHMP4B-201ENST00000217402 OR2T35Q8NGX2 323 aa21.19■□□□□ 0.98
CHMP4B-201ENST00000217402 MDFIQ99750 246 aa21.19■□□□□ 0.98
CHMP4B-201ENST00000217402 RANGRFQ9HD47 186 aaPredicted RBP21.19■□□□□ 0.98
CHMP4B-201ENST00000217402 S4R3C0 116 aa21.19■□□□□ 0.98
CHMP4B-201ENST00000217402 TENM1Q9UKZ4 2725 aa21.19■□□□□ 0.98
CHMP4B-201ENST00000217402 OR8U8P0C7N1 319 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 CAV2P51636 162 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 TAS2R30P59541 319 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 C15orf32Q32M92 178 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 Q5BKY6 102 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 C12orf54Q6X4T0 127 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 THYN1Q9P016 225 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 MBD2Q9UBB5 411 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 COL6A5A8TX70 2615 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 TRAV14DV4A0A0A6YYC5 116 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 FAM223BA6NKX1 122 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 TSC22D2O75157 780 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 IFNA4P05014 189 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 FAM223AQ8IWN6 122 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 MYOZ3Q8TDC0 251 aa21.18■□□□□ 0.98
CHMP4B-201ENST00000217402 IGHV3-11P01762 117 aa21.17■□□□□ 0.98
CHMP4B-201ENST00000217402 KIAA0141Q14154 515 aaPredicted RBP21.17■□□□□ 0.98
CHMP4B-201ENST00000217402 KLK9Q2XQG4 91 aa21.17■□□□□ 0.98
CHMP4B-201ENST00000217402 PRSS54Q6PEW0 395 aa21.17■□□□□ 0.98
CHMP4B-201ENST00000217402 NOXA1Q86UR1 476 aa21.17■□□□□ 0.98
CHMP4B-201ENST00000217402 ZNF491Q8N8L2 437 aa21.17■□□□□ 0.98
CHMP4B-201ENST00000217402 RNF126Q9BV68 326 aa21.17■□□□□ 0.98
CHMP4B-201ENST00000217402 KLK9Q9UKQ9 250 aa21.17■□□□□ 0.98
CHMP4B-201ENST00000217402 A0A1W2PRX2 142 aa21.16■□□□□ 0.98
CHMP4B-201ENST00000217402 MFSD2BA6NFX1 497 aa21.16■□□□□ 0.98
CHMP4B-201ENST00000217402 SMLR1H3BR10 107 aa21.16■□□□□ 0.98
CHMP4B-201ENST00000217402 IGHV3-48P01763 117 aa21.16■□□□□ 0.98
CHMP4B-201ENST00000217402 OPRK1P41145 380 aa21.16■□□□□ 0.98
CHMP4B-201ENST00000217402 RAB11AP62491 216 aa21.16■□□□□ 0.98
CHMP4B-201ENST00000217402 ATP5G2Q06055 141 aa21.16■□□□□ 0.98
CHMP4B-201ENST00000217402 PVRIGQ6DKI7 326 aa21.16■□□□□ 0.98
CHMP4B-201ENST00000217402 OR5B12Q96R08 314 aa21.16■□□□□ 0.98
CHMP4B-201ENST00000217402 FAM24AA6NFZ4 105 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 E5RGE8 158 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 CORTO00230 105 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 MT-CO2P00403 227 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 IGHV3-23P01764 117 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 METTL15P1P0C7V9 234 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 ATP5IP56385 69 aaPredicted RBP21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 FGL1Q08830 312 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 ETV3LQ6ZN32 361 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 C18orf65Q6ZTR6 163 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 C3orf56Q8N813 242 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 THAP6Q8TBB0 222 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 USMG5Q96IX5 58 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 GNB4Q9HAV0 340 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 LYRM2Q9NU23 88 aaPredicted RBP21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 A0A0G2JLM5 398 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 K7EIM0 57 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 CCNKO75909 580 aa21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 RNASEH2CQ8TDP1 164 aaKnown RBP21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 TSSC4Q9Y5U2 329 aaPredicted RBP21.15■□□□□ 0.98
CHMP4B-201ENST00000217402 I3L2K1 104 aa21.14■□□□□ 0.97
CHMP4B-201ENST00000217402 EXOSC2Q13868 293 aaKnown RBP21.14■□□□□ 0.97
CHMP4B-201ENST00000217402 OR8G2PQ6IF36 304 aa21.14■□□□□ 0.97
CHMP4B-201ENST00000217402 TMEM14EPQ6UXP3 125 aa21.14■□□□□ 0.97
CHMP4B-201ENST00000217402 DCUN1D4Q92564 292 aa21.14■□□□□ 0.97
CHMP4B-201ENST00000217402 UBE2E2Q96LR5 201 aa21.14■□□□□ 0.97
CHMP4B-201ENST00000217402 CITED1Q99966 193 aa21.14■□□□□ 0.97
CHMP4B-201ENST00000217402 FNDC4Q9H6D8 234 aaPredicted RBP21.14■□□□□ 0.97
CHMP4B-201ENST00000217402 MLANAQ16655 118 aa21.13■□□□□ 0.97
CHMP4B-201ENST00000217402 AKAP14Q86UN6 197 aa21.13■□□□□ 0.97
CHMP4B-201ENST00000217402 SCARB1Q8WTV0 552 aa21.13■□□□□ 0.97
CHMP4B-201ENST00000217402 ST6GAL2Q96JF0 529 aa21.13■□□□□ 0.97
CHMP4B-201ENST00000217402 IGSF23A1L1A6 192 aa21.12■□□□□ 0.97
CHMP4B-201ENST00000217402 NUDT19A8MXV4 375 aa21.12■□□□□ 0.97
CHMP4B-201ENST00000217402 KLHL30-AS1Q8NEE0 82 aa21.12■□□□□ 0.97
CHMP4B-201ENST00000217402 ZNF747Q9BV97 191 aa21.12■□□□□ 0.97
CHMP4B-201ENST00000217402 G3V3Q6 166 aa21.11■□□□□ 0.97
CHMP4B-201ENST00000217402 P2RY1P47900 373 aa21.11■□□□□ 0.97
CHMP4B-201ENST00000217402 NSUN5P1Q3KNT7 163 aa21.11■□□□□ 0.97
CHMP4B-201ENST00000217402 EEF1AKMT3Q96AZ1 226 aa21.11■□□□□ 0.97
CHMP4B-201ENST00000217402 CXorf58Q96LI9 332 aa21.11■□□□□ 0.97
CHMP4B-201ENST00000217402 CST7O76096 145 aa21.11■□□□□ 0.97
CHMP4B-201ENST00000217402 CDX1P47902 265 aaPredicted RBP21.11■□□□□ 0.97
CHMP4B-201ENST00000217402 TMEM252Q8N6L7 170 aa21.11■□□□□ 0.97
CHMP4B-201ENST00000217402 FXYD6-FXYD2A0A087WZ82 144 aa21.1■□□□□ 0.97
CHMP4B-201ENST00000217402 LYL1P12980 280 aa21.1■□□□□ 0.97
CHMP4B-201ENST00000217402 UBAC2Q8NBM4 344 aa21.1■□□□□ 0.97
CHMP4B-201ENST00000217402 VN1R17PQ8TDU5 208 aa21.1■□□□□ 0.97
CHMP4B-201ENST00000217402 C21orf62Q9NYP8 219 aa21.1■□□□□ 0.97
CHMP4B-201ENST00000217402 RPS10-NUDT3A0A1W2PQS6 291 aa21.09■□□□□ 0.97
CHMP4B-201ENST00000217402 ANKRD34BA5PLL1 514 aa21.09■□□□□ 0.97
CHMP4B-201ENST00000217402 PMS2P5A8MQ11 134 aa21.09■□□□□ 0.97
CHMP4B-201ENST00000217402 CD69Q07108 199 aa21.09■□□□□ 0.97
CHMP4B-201ENST00000217402 SLC16A13Q7RTY0 426 aa21.09■□□□□ 0.97
CHMP4B-201ENST00000217402 HAPLN4Q86UW8 402 aa21.09■□□□□ 0.97
CHMP4B-201ENST00000217402 TMEM217Q8N7C4 229 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms